Conservation of cofitness between HSERO_RS00910 and HSERO_RS02630 in Herbaspirillum seropedicae SmR1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS00910 peptidase 1.0 HSERO_RS02630 membrane protein 0.42 14
Variovorax sp. SCN45 0.81 GFF4484 ATP-dependent protease subunit HslV (EC 3.4.25.2) 0.63 GFF1356 Putative manganese efflux pump MntP low > 127
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS01635 ATP-dependent protease subunit HslV 0.61 BPHYT_RS33240 membrane protein
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_0748 ATP-dependent protease HslVU, peptidase subunit 0.29 B158DRAFT_0302 Predicted membrane protein low > 40
Dickeya dadantii 3937 0.69 DDA3937_RS00920 ATP-dependent protease subunit HslV 0.59 DDA3937_RS11300 manganese efflux pump MntP low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS20455 ATP-dependent protease subunit HslV 0.60 HGI48_RS11335 manganese efflux pump MntP low > 71
Serratia liquefaciens MT49 0.69 IAI46_24570 ATP-dependent protease subunit HslV 0.58 IAI46_14830 manganese efflux pump MntP 0.63 25
Dickeya dianthicola ME23 0.69 DZA65_RS21500 ATP-dependent protease subunit HslV 0.60 DZA65_RS11680 manganese efflux pump MntP low > 75
Pectobacterium carotovorum WPP14 0.68 HER17_RS00855 ATP-dependent protease subunit HslV 0.59 HER17_RS11345 manganese efflux pump MntP low > 75
Rahnella sp. WP5 0.67 EX31_RS14240 ATP-dependent protease subunit HslV 0.57 EX31_RS24680 manganese efflux pump MntP low > 89
Erwinia tracheiphila SCR3 0.67 LU632_RS19670 hslV ATP-dependent protease subunit HslV 0.56 LU632_RS00575 mntP manganese efflux pump MntP low > 74
Escherichia coli ECRC102 0.66 NIAGMN_11490 hslV ATP-dependent protease subunit HslV 0.56 NIAGMN_01555 mntP manganese efflux pump MntP
Escherichia coli ECRC100 0.66 OKFHMN_13735 hslV ATP-dependent protease subunit HslV 0.56 OKFHMN_26505 mntP manganese efflux pump MntP low > 80
Escherichia coli ECRC99 0.66 KEDOAH_14425 hslV ATP-dependent protease subunit HslV 0.56 KEDOAH_01600 mntP manganese efflux pump MntP
Escherichia coli ECRC98 0.66 JDDGAC_17360 hslV ATP-dependent protease subunit HslV 0.56 JDDGAC_01080 mntP manganese efflux pump MntP low > 86
Escherichia fergusonii Becca 0.66 EFB2_04686 ATP-dependent protease subunit HslV 0.56 EFB2_02179 putative manganese efflux pump MntP low > 86
Escherichia coli Nissle 1917 0.66 ECOLIN_RS22640 ATP-dependent protease subunit HslV 0.56 ECOLIN_RS10135 manganese efflux pump MntP
Escherichia coli ECRC101 0.66 MCAODC_04235 hslV ATP-dependent protease subunit HslV 0.56 MCAODC_18900 mntP manganese efflux pump MntP low > 87
Escherichia coli BW25113 0.66 b3932 hslV ATP-dependent protease peptidase subunit (NCBI) 0.56 b1821 b1821 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_12380 hslV ATP-dependent protease subunit HslV 0.56 HEPCGN_04905 mntP manganese efflux pump MntP low > 87
Escherichia coli BL21 0.66 ECD_03817 peptidase component of the HslUV protease 0.56 ECD_01791 putative Mn(2+) efflux pump, mntR-regulated
Escherichia coli ECOR27 0.66 NOLOHH_05880 hslV ATP-dependent protease subunit HslV 0.56 NOLOHH_17030 mntP manganese efflux pump MntP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_04119 ATP-dependent protease subunit HslV 0.56 OHPLBJKB_01909 putative manganese efflux pump MntP low > 73
Escherichia coli ECRC62 0.66 BNILDI_05650 hslV ATP-dependent protease subunit HslV 0.56 BNILDI_15810 mntP manganese efflux pump MntP low > 75
Pantoea sp. MT58 0.66 IAI47_00850 ATP-dependent protease subunit HslV 0.55 IAI47_01120 manganese efflux pump MntP low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_04537 ATP-dependent protease subunit HslV 0.56 MPMX20_02726 putative manganese efflux pump MntP low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4405 ATP-dependent protease HslVU, peptidase subunit 0.57 EX28DRAFT_0738 Predicted membrane protein low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS00755 ATP-dependent protease subunit HslV 0.58 BWI76_RS17915 membrane protein low > 92
Rhodanobacter denitrificans MT42 0.65 LRK55_RS08290 ATP-dependent protease subunit HslV 0.57 LRK55_RS05125 manganese efflux pump MntP family protein
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS08525 ATP-dependent protease subunit HslV 0.57 LRK54_RS05350 manganese efflux pump MntP family protein
Alteromonas macleodii MIT1002 0.62 MIT1002_03660 ATP-dependent protease subunit HslV 0.55 MIT1002_03268 putative manganese efflux pump MntP low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.61 A4249_RS12390 ATP-dependent protease subunit HslV 0.48 A4249_RS06635 manganese efflux pump MntP family protein low > 48
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_0395 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B 0.64 Psyr_1725 Protein of unknown function DUF204 low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_0395 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B 0.64 Psyr_1725 Protein of unknown function DUF204 low > 86
Rhodospirillum rubrum S1H 0.60 Rru_A3599 20S proteasome, A and B subunits (NCBI) 0.35 Rru_A0282 Protein of unknown function DUF204 (NCBI) low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU1577 hslV ATP-dependent protease hslV (TIGR) 0.38 DVU2910 membrane protein, putative (TIGR) low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2314 ATP-dependent protease HslV (EC 3.4.25.-) 0.56 GFF2835 Putative membrane protein low > 78
Azospirillum sp. SherDot2 0.54 MPMX19_02548 ATP-dependent protease subunit HslV 0.44 MPMX19_04144 putative manganese efflux pump MntP low > 112

Not shown: 50 genomes with orthologs for HSERO_RS00910 only; 9 genomes with orthologs for HSERO_RS02630 only