Conservation of cofitness between HSERO_RS10860 and HSERO_RS02415 in Herbaspirillum seropedicae SmR1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS10860 RNA pseudouridylate synthase 1.0 HSERO_RS02415 hemolysin D 0.32 8
Variovorax sp. OAS795 0.65 ABID97_RS00980 pseudouridine synthase 0.52 ABID97_RS00320 efflux RND transporter periplasmic adaptor subunit low > 91
Variovorax sp. SCN45 0.64 GFF3530 Pseudouridine synthase 0.49 GFF3726 RND efflux system, membrane fusion protein low > 127
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12155 RNA-binding protein S4 0.43 BPHYT_RS16175 hemolysin D low > 109
Castellaniella sp019104865 MT123 0.63 ABCV34_RS03070 pseudouridine synthase 0.38 ABCV34_RS04230 efflux RND transporter periplasmic adaptor subunit low > 48
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_00606 23S rRNA pseudouridine2604 synthase 0.42 H281DRAFT_04171 membrane fusion protein, multidrug efflux system low > 103
Lysobacter sp. OAE881 0.39 ABIE51_RS13020 rRNA pseudouridine synthase 0.33 ABIE51_RS17985 efflux RND transporter periplasmic adaptor subunit low > 62
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15885 rRNA pseudouridine synthase 0.36 LRK54_RS02095 efflux RND transporter periplasmic adaptor subunit low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15640 rRNA pseudouridine synthase 0.36 LRK55_RS01870 efflux RND transporter periplasmic adaptor subunit low > 63
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_04535 rsuA RNA-binding protein 0.38 OKGIIK_09165 acrA efflux transporter periplasmic adaptor subunit low > 52
Pseudomonas sp. RS175 0.36 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF 0.44 PFR28_02462 Multidrug resistance protein MexA low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.47 PfGW456L13_2955 RND efflux system, membrane fusion protein CmeA low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_05610 RNA-binding protein 0.46 AO356_28725 RND transporter — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.46 Pf1N1B4_4773 RND efflux system, membrane fusion protein CmeA — —
Pseudomonas simiae WCS417 0.35 PS417_05870 RNA-binding protein S4 0.48 PS417_12590 RND transporter — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS05940 RNA-binding protein S4 0.49 PFLU_RS13285 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS05940 RNA-binding protein S4 0.49 PFLU_RS13285 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_16865 RNA-binding protein 0.46 AO353_26840 RND transporter low > 101
Pseudomonas putida KT2440 0.30 PP_1191 S4 domain protein 0.45 PP_3455 Multidrug efflux RND membrane fusion protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.46 Pf6N2E2_1660 RND efflux system, membrane fusion protein CmeA low > 103
Alteromonas macleodii MIT1002 0.25 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F 0.36 MIT1002_00134 Acriflavine resistance protein A precursor low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_1010 pseudouridine synthase 0.21 Echvi_3741 RND family efflux transporter, MFP subunit low > 79

Not shown: 10 genomes with orthologs for HSERO_RS10860 only; 35 genomes with orthologs for HSERO_RS02415 only