Conservation of cofitness between HGI48_RS15580 and HGI48_RS11670 in Dickeya dianthicola 67-19

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS15580 cytoskeleton protein RodZ 1.0 HGI48_RS11670 lytic murein transglycosylase 0.51 3
Dickeya dianthicola ME23 0.89 DZA65_RS16655 cytoskeleton protein RodZ 0.99 DZA65_RS12155 lytic murein transglycosylase low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS15470 cytoskeleton protein RodZ 0.90 DDA3937_RS11610 lytic murein transglycosylase low > 74
Alteromonas macleodii MIT1002 0.18 MIT1002_02789 Cytoskeleton protein RodZ 0.26 MIT1002_00408 Membrane-bound lytic murein transglycosylase B precursor low > 70
Shewanella sp. ANA-3 0.17 Shewana3_1228 hypothetical protein (RefSeq) 0.24 Shewana3_2459 lytic murein transglycosylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.16 SO3313 conserved hypothetical protein (NCBI ptt file) 0.24 SO1994 membrane-bound lytic transglycolase-related protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_15885 Cro/Cl family transcriptional regulator 0.38 AO353_06430 murein transglycosylase low > 101
Shewanella loihica PV-4 0.16 Shew_1289 hypothetical protein (RefSeq) 0.25 Shew_2141 lytic murein transglycosylase (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.15 PFLU_RS24805 helix-turn-helix domain-containing protein 0.35 PFLU_RS26610 lytic murein transglycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS24805 helix-turn-helix domain-containing protein 0.35 PFLU_RS26610 lytic murein transglycosylase low > 109
Pseudomonas sp. S08-1 0.15 OH686_17525 Cytoskeleton protein RodZ 0.35 OH686_09270 Membrane-bound lytic murein transglycosylase B low > 80
Pseudomonas stutzeri RCH2 0.15 Psest_1261 Uncharacterized protein conserved in bacteria 0.39 Psest_0521 lytic murein transglycosylase low > 67
Pseudomonas simiae WCS417 0.15 PS417_23150 Cro/Cl family transcriptional regulator 0.36 PS417_24680 murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_855 FIG021952: putative membrane protein 0.37 Pf1N1B4_2701 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS15270 DUF4115 domain-containing protein 0.32 RALBFv3_RS18395 lytic murein transglycosylase low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS12735 DUF4115 domain-containing protein 0.32 UW163_RS20735 lytic murein transglycosylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_1247 conserved hypothetical protein 0.39 Psyr_4357 HopAJ2 protein low > 86
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_1247 conserved hypothetical protein 0.39 Psyr_4357 HopAJ2 protein low > 86
Pseudomonas fluorescens GW456-L13 0.11 PfGW456L13_4863 FIG021952: putative membrane protein 0.38 PfGW456L13_1369 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Ralstonia solanacearum PSI07 0.11 RPSI07_RS18105 DUF4115 domain-containing protein 0.32 RPSI07_RS05710 lytic murein transglycosylase — —
Pseudomonas sp. RS175 0.10 PFR28_00296 Cytoskeleton protein RodZ 0.38 PFR28_03859 Tn3 family transposase TnXax1 low > 88
Pseudomonas putida KT2440 0.10 PP_0852 Transcriptional regulator, Cro/CI family 0.40 PP_4798 putative Membrane-bound lytic murein transglycosylase low > 96
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_06595 Cro/Cl family transcriptional regulator 0.38 AO356_15355 murein transglycosylase — —
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_3179 FIG021952: putative membrane protein 0.38 Pf6N2E2_5007 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Ralstonia solanacearum GMI1000 0.08 RS_RS06080 DUF4115 domain-containing protein 0.32 RS_RS23125 lytic murein transglycosylase — —
Variovorax sp. OAS795 0.08 ABID97_RS14220 helix-turn-helix domain-containing protein 0.32 ABID97_RS06750 lytic murein transglycosylase — —

Not shown: 32 genomes with orthologs for HGI48_RS15580 only; 17 genomes with orthologs for HGI48_RS11670 only