Conservation of cofitness between HGI48_RS03400 and HGI48_RS06345 in Dickeya dianthicola 67-19

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase 1.0 HGI48_RS06345 ROK family protein 0.63 7
Dickeya dianthicola ME23 0.98 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase 0.98 DZA65_RS06690 ROK family protein low > 75
Pectobacterium carotovorum WPP14 0.85 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase 0.82 HER17_RS15115 ROK family protein low > 75
Rahnella sp. WP5 0.82 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.81 EX31_RS23255 ROK family protein low > 89
Serratia liquefaciens MT49 0.82 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.83 IAI46_06080 ROK family transcriptional regulator low > 86
Pantoea sp. MT58 0.82 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.77 IAI47_13890 ROK family transcriptional regulator 0.40 60
Escherichia fergusonii Becca 0.81 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.76 EFB2_03427 N-acetylglucosamine repressor low > 86
Escherichia coli Nissle 1917 0.81 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.76 ECOLIN_RS03610 DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC99 0.81 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 KEDOAH_20800 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC102 0.81 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 NIAGMN_05225 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC100 0.81 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 OKFHMN_07170 nagC DNA-binding transcriptional regulator NagC low > 80
Escherichia coli ECRC98 0.81 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 JDDGAC_10820 nagC DNA-binding transcriptional regulator NagC low > 86
Escherichia coli ECRC101 0.81 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 MCAODC_26385 nagC DNA-binding transcriptional regulator NagC low > 87
Escherichia coli ECOR38 0.81 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 HEPCGN_01060 nagC DNA-binding transcriptional regulator NagC low > 87
Escherichia coli BW25113 0.81 b2903 gcvP glycine dehydrogenase (NCBI) 0.76 b0676 nagC DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) low > 76
Escherichia coli BL21 0.81 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 0.76 ECD_00633 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor low > 61
Escherichia coli ECRC62 0.81 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 BNILDI_21555 nagC DNA-binding transcriptional regulator NagC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.76 OHPLBJKB_03039 N-acetylglucosamine repressor low > 73
Escherichia coli ECOR27 0.81 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 0.76 NOLOHH_23550 nagC DNA-binding transcriptional regulator NagC low > 75
Klebsiella michiganensis M5al 0.80 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.78 BWI76_RS08205 DNA-binding transcriptional dual regulator NagC low > 92
Erwinia tracheiphila SCR3 0.80 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase 0.75 LU632_RS16255 ROK family transcriptional regulator low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.75 GFF4584 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family 0.48 65
Enterobacter asburiae PDN3 0.79 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.77 EX28DRAFT_2299 Transcriptional regulator/sugar kinase low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.77 MPMX20_01322 N-acetylglucosamine repressor low > 85
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_15330 glycine dehydrogenase (decarboxylating) 0.62 CSW01_05065 N-acetylglucosamine repressor low > 62
Sinorhizobium meliloti 1021 0.53 SMc02049 glycine dehydrogenase 0.13 SMa2303 ROK family transcriptional regulator low > 103
Acidovorax sp. GW101-3H11 0.53 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.16 Ac3H11_2882 FIG01198523: hypothetical protein low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_18410 glycine dehydrogenase (aminomethyl-transferring) 0.19 CA264_08710 sugar kinase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.52 CA265_RS25185 glycine dehydrogenase (aminomethyl-transferring) 0.17 CA265_RS15640 sugar kinase low > 88
Bacteroides stercoris CC31F 0.48 HMPREF1181_RS16815 aminomethyl-transferring glycine dehydrogenase 0.15 HMPREF1181_RS10130 ROK family transcriptional regulator 0.62 14
Bacteroides ovatus ATCC 8483 0.48 BACOVA_04038 glycine dehydrogenase 0.15 BACOVA_01791 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.47 BT1147 glycine dehydrogenase [decarboxylating] (NCBI ptt file) 0.15 BT0433 putative xylose repressor (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS15115 aminomethyl-transferring glycine dehydrogenase 0.17 HMPREF1078_RS06205 ROK family transcriptional regulator 0.67 27
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS18780 aminomethyl-transferring glycine dehydrogenase 0.15 HMPREF1058_RS07285 ROK family transcriptional regulator low > 67
Phocaeicola dorei CL03T12C01 0.46 ABI39_RS15100 aminomethyl-transferring glycine dehydrogenase 0.15 ABI39_RS21185 ROK family transcriptional regulator low > 72

Not shown: 51 genomes with orthologs for HGI48_RS03400 only; 4 genomes with orthologs for HGI48_RS06345 only