Conservation of cofitness between HER17_RS13490 and HER17_RS21600 in Pectobacterium carotovorum WPP14

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS21600 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.65 13
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.93 HGI48_RS21380 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 71
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.93 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.93 DDA3937_RS21605 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 74
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.89 IAI46_25110 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.89 EX31_RS06140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 89
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.89 IAI47_00300 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 76
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.87 LU632_RS24815 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.91 OHPLBJKB_04312 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.91 GFF1716 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 78
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.90 ECD_03625 5-methylaminomethyl-2-thiouridine modification at tRNA U34 — —
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.91 BNILDI_04605 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.91 b3741 gidA glucose-inhibited division protein A (NCBI) low > 76
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.91 NOLOHH_06920 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.90 EX28DRAFT_4017 glucose-inhibited division protein A — —
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.89 MPMX20_04626 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 85
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.91 HEPCGN_13500 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 87
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.91 EFB2_04892 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 86
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.90 BWI76_RS00230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.91 ECOLIN_RS21515 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.90 KEDOAH_13365 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.90 JDDGAC_18405 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.90 NIAGMN_12540 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.90 MCAODC_05290 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.90 OKFHMN_14785 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 80
Acinetobacter radioresistens SK82 0.72 MPMX26_00080 NAD-dependent malic enzyme 0.64 MPMX26_01147 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 36
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.79 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 62
Shewanella sp. ANA-3 0.69 Shewana3_0750 malate dehydrogenase (RefSeq) 0.75 Shewana3_0002 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.75 SO4758 gidA glucose-inhibited division protein A (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2621 malate dehydrogenase (RefSeq) 0.75 Sama_3655 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq) — —
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.76 Shew_3856 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_1561 NAD-dependent malic enzyme 0.70 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_1561 NAD-dependent malic enzyme 0.70 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Alteromonas macleodii MIT1002 0.64 MIT1002_00455 NAD-dependent malic enzyme 0.74 MIT1002_04124 Glucose-inhibited division protein A low > 70
Fusobacterium nucleatum SB010 0.36 HUW76_04125 NAD-dependent malic enzyme 0.46 HUW76_10170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 35
Ralstonia solanacearum PSI07 0.35 RPSI07_RS13995 NAD-dependent malic enzyme 0.68 RPSI07_RS08410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00026 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) 0.69 H281DRAFT_02385 tRNA uridine 5-carboxymethylaminomethyl modification enzyme — —

Not shown: 1 genomes with orthologs for HER17_RS13490 only; 62 genomes with orthologs for HER17_RS21600 only