Conservation of cofitness between HER17_RS05585 and HER17_RS20895 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05585 DNA/RNA nuclease SfsA 1.0 HER17_RS20895 isoaspartyl peptidase/L-asparaginase 0.74 1
Serratia liquefaciens MT49 0.75 IAI46_21205 DNA/RNA nuclease SfsA 0.77 IAI46_07840 isoaspartyl peptidase/L-asparaginase low > 86
Dickeya dianthicola 67-19 0.72 HGI48_RS16045 DNA/RNA nuclease SfsA 0.79 HGI48_RS00620 isoaspartyl peptidase/L-asparaginase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS17130 DNA/RNA nuclease SfsA 0.80 DZA65_RS00675 isoaspartyl peptidase/L-asparaginase low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS15930 DNA/RNA nuclease SfsA 0.79 DDA3937_RS20595 isoaspartyl peptidase/L-asparaginase low > 74
Rahnella sp. WP5 0.71 EX31_RS03245 DNA/RNA nuclease SfsA 0.72 EX31_RS18745 isoaspartyl peptidase/L-asparaginase low > 89
Pantoea sp. MT58 0.67 IAI47_15630 DNA/RNA nuclease SfsA 0.68 IAI47_13135 isoaspartyl peptidase/L-asparaginase low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS20075 sfsA DNA/RNA nuclease SfsA 0.70 LU632_RS09550 isoaspartyl peptidase/L-asparaginase low > 74
Enterobacter sp. TBS_079 0.67 MPMX20_00832 Sugar fermentation stimulation protein A 0.64 MPMX20_01468 Isoaspartyl peptidase low > 85
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.64 b0828 iaaA L-asparaginase (NCBI) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.64 HEPCGN_01925 iaaA beta-aspartyl-peptidase low > 87
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.64 BNILDI_20740 iaaA beta-aspartyl-peptidase low > 75
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.64 ECD_00795 Isoaspartyl peptidase low > 61
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.64 NOLOHH_22465 iaaA beta-aspartyl-peptidase low > 75
Escherichia coli Nissle 1917 0.66 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.64 ECOLIN_RS04405 beta-aspartyl-peptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.64 OHPLBJKB_02884 Isoaspartyl peptidase low > 73
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3735 sugar fermentation stimulation protein 0.65 EX28DRAFT_2136 Asparaginase low > 76
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.64 EFB2_03278 Isoaspartyl peptidase low > 86
Klebsiella michiganensis M5al 0.65 BWI76_RS05020 sugar fermentation stimulation protein SfsA 0.62 BWI76_RS09090 beta-aspartyl-peptidase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.63 GFF726 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase low > 78
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_03160 DNA/RNA nuclease SfsA 0.39 CSW01_13180 isoaspartyl peptidase/L-asparaginase low > 62
Shewanella loihica PV-4 0.56 Shew_3128 sugar fermentation stimulation protein (RefSeq) 0.47 Shew_2171 peptidase T2, asparaginase 2 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.53 Sama_0781 sugar fermentation stimulation protein A (RefSeq) 0.47 Sama_1617 asparaginase family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.52 Shewana3_3403 sugar fermentation stimulation protein A (RefSeq) 0.43 Shewana3_1895 peptidase T2, asparaginase 2 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.43 SO2115 asparaginase family protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0055 sugar fermentation stimulation protein 0.46 B158DRAFT_1238 Asparaginase low > 40
Alteromonas macleodii MIT1002 0.40 MIT1002_03689 Sugar fermentation stimulation protein A 0.43 MIT1002_01678 Isoaspartyl peptidase precursor low > 70
Agrobacterium fabrum C58 0.34 Atu1605 sugar fermentation stimulation protein 0.35 Atu3044 asparaginase low > 89
Azospirillum sp. SherDot2 0.33 MPMX19_00188 Sugar fermentation stimulation protein A 0.41 MPMX19_04010 Isoaspartyl peptidase low > 112
Caulobacter crescentus NA1000 0.31 CCNA_02757 sugar fermentation stimulation protein A 0.30 CCNA_00612 L-asparaginase low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_02757 sugar fermentation stimulation protein A 0.30 CCNA_00612 L-asparaginase low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU3224 sfsA sugar fermentation stimulation protein (TIGR) 0.26 DVU2242 asparaginase (EC 3.5.1.1) (from data) low > 55

Not shown: 28 genomes with orthologs for HER17_RS05585 only; 28 genomes with orthologs for HER17_RS20895 only