Conservation of cofitness between HER17_RS11250 and HER17_RS16415 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11250 YcgL domain-containing protein 1.0 HER17_RS16415 transcriptional regulator GcvA 0.73 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_02512 Protein YcgL 0.91 OHPLBJKB_00923 Glycine cleavage system transcriptional activator low > 73
Escherichia coli ECRC62 0.86 BNILDI_18945 ycgL Protein YcgL 0.91 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA low > 75
Escherichia coli ECOR27 0.86 NOLOHH_20785 ycgL Protein YcgL 0.91 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA low > 75
Escherichia coli ECRC102 0.84 NIAGMN_27985 ycgL Protein YcgL 0.91 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC98 0.84 JDDGAC_06275 ycgL Protein YcgL 0.91 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA low > 86
Escherichia coli ECRC101 0.84 MCAODC_21935 ycgL Protein YcgL 0.91 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA low > 87
Escherichia fergusonii Becca 0.84 EFB2_02752 Protein YcgL 0.91 EFB2_01109 Glycine cleavage system transcriptional activator low > 86
Escherichia coli ECRC99 0.84 KEDOAH_25250 ycgL Protein YcgL 0.91 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA — —
Serratia liquefaciens MT49 0.84 IAI46_14510 YcgL domain-containing protein 0.90 IAI46_20340 transcriptional regulator GcvA low > 86
Escherichia coli ECRC100 0.84 OKFHMN_28235 ycgL Protein YcgL 0.91 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli BW25113 0.84 b1179 ycgL conserved protein (NCBI) 0.91 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli Nissle 1917 0.84 ECOLIN_RS07135 YcgL domain-containing protein 0.91 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECOR38 0.84 HEPCGN_24685 ycgL Protein YcgL 0.91 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA low > 87
Enterobacter sp. TBS_079 0.83 MPMX20_02706 Protein YcgL 0.90 MPMX20_03671 Glycine cleavage system transcriptional activator low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0759 Uncharacterized protein conserved in bacteria 0.90 EX28DRAFT_2883 Transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS17775 hypothetical protein 0.90 BWI76_RS22955 transcriptional regulator GcvA low > 92
Dickeya dianthicola ME23 0.80 DZA65_RS11580 hypothetical protein 0.94 DZA65_RS05390 transcriptional regulator GcvA low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS11200 YcgL domain-containing protein 0.95 DDA3937_RS05050 transcriptional regulator GcvA low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS11235 YcgL domain-containing protein 0.94 HGI48_RS05050 transcriptional regulator GcvA low > 71
Rahnella sp. WP5 0.78 EX31_RS10575 hypothetical protein 0.88 EX31_RS13110 transcriptional regulator GcvA low > 89
Pantoea sp. MT58 0.78 IAI47_08860 YcgL domain-containing protein 0.90 IAI47_04025 transcriptional regulator GcvA low > 76
Erwinia tracheiphila SCR3 0.76 LU632_RS13110 YcgL domain-containing protein 0.91 LU632_RS06255 transcriptional regulator GcvA low > 74
Shewanella loihica PV-4 0.59 Shew_2183 hypothetical protein (RefSeq) 0.66 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq) — —
Shewanella amazonensis SB2B 0.57 Sama_1929 hypothetical protein (RefSeq) 0.67 Sama_2429 DNA-binding transcriptional activator GcvA (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_2381 hypothetical protein (RefSeq) 0.67 Shewana3_2894 DNA-binding transcriptional activator GcvA (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO2575 conserved hypothetical protein (NCBI ptt file) 0.67 SO1533 glycine cleavage system transcriptional activator, putative (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.48 MIT1002_02586 YcgL domain protein 0.60 MIT1002_01520 Gcv operon activator low > 70
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_1575 Uncharacterized protein conserved in bacteria 0.51 B158DRAFT_0909 Transcriptional regulator low > 40
Lysobacter sp. OAE881 0.35 ABIE51_RS02050 YcgL domain-containing protein 0.23 ABIE51_RS00605 LysR substrate-binding domain-containing protein low > 62
Acinetobacter radioresistens SK82 0.35 MPMX26_01641 Protein YcgL 0.30 MPMX26_01927 Glycine cleavage system transcriptional activator — —
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.5073.1 FIG01210860: hypothetical protein 0.23 Xcc-8004.1418.1 Glycine cleavage system transcriptional activator — —
Marinobacter adhaerens HP15 0.30 HP15_1881 YcgL domain protein 0.27 HP15_1669 transcriptional regulator, LysR family protein low > 73

Not shown: 0 genomes with orthologs for HER17_RS11250 only; 54 genomes with orthologs for HER17_RS16415 only