Conservation of cofitness between HER17_RS20780 and HER17_RS16020 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS16020 branched-chain amino acid transport system II carrier protein 0.88 7
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.89 DZA65_RS05830 branched-chain amino acid transport system II carrier protein — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.89 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.89 HGI48_RS05505 branched-chain amino acid transport system II carrier protein — —
Rahnella sp. WP5 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC 0.80 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Serratia liquefaciens MT49 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC 0.85 IAI46_04795 branched-chain amino acid transport system II carrier protein — —
Escherichia coli ECOR27 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.82 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli BW25113 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) 0.79 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia coli ECRC99 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC98 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC100 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC102 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Enterobacter sp. TBS_079 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 0.79 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.79 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ low > 55
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.79 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 0.79 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein — —
Escherichia coli BL21 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I 0.79 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val — —
Escherichia coli ECOR38 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I 0.79 EX28DRAFT_2573 branched-chain amino acid uptake carrier — —
Escherichia coli ECRC62 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC 0.79 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.79 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.79 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1472 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.66 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_211 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.67 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12880 ADP-heptose--LPS heptosyltransferase 0.66 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0521 Glycosyl transferase, family 9 0.66 Psyr_2015 Branched-chain amino acid transport system II carrier protein — —
Pseudomonas simiae WCS417 0.50 PS417_02235 ADP-heptose--LPS heptosyltransferase 0.63 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0521 Glycosyl transferase, family 9 0.66 Psyr_2015 Branched-chain amino acid transport system II carrier protein — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.64 PFLU_RS08980 branched-chain amino acid transport system II carrier protein — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.64 PFLU_RS08980 branched-chain amino acid transport system II carrier protein — —
Pseudomonas sp. RS175 0.49 PFR28_05064 Lipopolysaccharide heptosyltransferase 1 0.67 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein — —
Pseudomonas stutzeri RCH2 0.49 Psest_0452 lipopolysaccharide heptosyltransferase I 0.52 Psest_2489 branched-chain amino acid uptake carrier — —
Pseudomonas sp. S08-1 0.48 OH686_09685 lipopolysaccharide heptosyltransferase I 0.68 OH686_01945 branched-chain amino acid transport system II carrier protein — —
Pseudomonas putida KT2440 0.48 PP_0342 ADP-heptose:LPS heptosyltransferase I 0.67 PP_4184 branched chain amino acid transporter — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_08945 ADP-heptose--LPS heptosyltransferase 0.67 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3670 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.67 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein — —

Not shown: 17 genomes with orthologs for HER17_RS20780 only; 8 genomes with orthologs for HER17_RS16020 only