Conservation of cofitness between HER17_RS20290 and HER17_RS15900 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20290 amino acid ABC transporter substrate-binding protein 1.0 HER17_RS15900 MFS transporter 0.63 18
Dickeya dadantii 3937 0.93 DDA3937_RS01270 amino acid ABC transporter substrate-binding protein 0.85 DDA3937_RS05575 MFS transporter low > 74
Dickeya dianthicola 67-19 0.93 HGI48_RS01255 amino acid ABC transporter substrate-binding protein 0.83 HGI48_RS05635 MFS transporter low > 71
Dickeya dianthicola ME23 0.93 DZA65_RS01300 amino acid ABC transporter substrate-binding protein 0.83 DZA65_RS05960 MFS transporter low > 75
Rahnella sp. WP5 0.86 EX31_RS12155 amino acid ABC transporter substrate-binding protein 0.78 EX31_RS22195 MFS transporter low > 89
Enterobacter sp. TBS_079 0.86 MPMX20_04177 Putative amino-acid ABC transporter-binding protein YhdW 0.75 MPMX20_01018 Inner membrane transport protein YajR low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3321 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.75 EX28DRAFT_2544 Arabinose efflux permease low > 76
Erwinia tracheiphila SCR3 0.85 LU632_RS19770 amino acid ABC transporter substrate-binding protein 0.76 LU632_RS18400 MFS transporter low > 74
Escherichia fergusonii Becca 0.84 EFB2_00555 Putative amino-acid ABC transporter-binding protein YhdW 0.74 EFB2_03630 Inner membrane transport protein YajR low > 86
Escherichia coli ECRC62 0.84 BNILDI_02095 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 BNILDI_22750 yajR Inner membrane transport protein YajR low > 75
Escherichia coli ECRC98 0.84 JDDGAC_21260 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 JDDGAC_12040 yajR Inner membrane transport protein YajR low > 86
Escherichia coli ECRC101 0.84 MCAODC_08155 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 MCAODC_27610 yajR Inner membrane transport protein YajR low > 87
Escherichia coli ECOR27 0.84 NOLOHH_09425 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 NOLOHH_01335 yajR Inner membrane transport protein YajR low > 75
Escherichia coli ECRC100 0.84 OKFHMN_17635 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 OKFHMN_08385 yajR Inner membrane transport protein YajR low > 80
Escherichia coli ECOR38 0.84 HEPCGN_16455 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 HEPCGN_07015 yajR Inner membrane transport protein YajR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00436 Putative amino-acid ABC transporter-binding protein YhdW 0.73 OHPLBJKB_03249 Inner membrane transport protein YajR low > 73
Escherichia coli ECRC102 0.84 NIAGMN_15395 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 NIAGMN_06440 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC99 0.84 KEDOAH_10515 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.73 KEDOAH_19580 yajR Inner membrane transport protein YajR — —
Escherichia coli Nissle 1917 0.84 ECOLIN_RS18775 amino acid ABC transporter substrate-binding protein 0.74 ECOLIN_RS02570 MFS transporter low > 55
Pantoea sp. MT58 0.84 IAI47_02375 amino acid ABC transporter substrate-binding protein 0.78 IAI47_14705 MFS transporter low > 76
Escherichia coli BL21 0.79 ECD_03126 putative amino-acid transporter subunit 0.73 ECD_00375 putative transporter low > 61
Pseudomonas stutzeri RCH2 0.77 Psest_3163 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.50 Psest_3575 Arabinose efflux permease low > 67
Pseudomonas sp. S08-1 0.75 OH686_17805 Amino acid ABC transporter, substrate-binding protein YhdW 0.51 OH686_15500 Inner membrane transport protein YajR low > 80
Pseudomonas simiae WCS417 0.74 PS417_23345 amino acid ABC transporter substrate-binding protein 0.54 PS417_25390 MFS transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS25160 amino acid ABC transporter substrate-binding protein 0.54 PFLU_RS27020 MFS transporter low > 109
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25 0.73 PFLU_RS25160 amino acid ABC transporter substrate-binding protein 0.54 PFLU_RS27020 MFS transporter low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas putida KT2440 0.72 PP_1297 putative amino-acid ABC transporter-binding protein YhdW 0.52 PP_0484 transporter of an unknown substrate low > 96
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_917 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 0.55 Pf1N1B4_2612 Putative transport protein low > 87
Pseudomonas sp. RS175 0.69 PFR28_03542 Putative amino-acid ABC transporter-binding protein YhdW 0.53 PFR28_03973 Inner membrane transport protein YajR low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) 0.52 Pf6N2E2_4889 Putative transport protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_17380 amino acid ABC transporter substrate-binding protein 0.52 AO356_14790 MFS transporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_04615 amino acid ABC transporter substrate-binding protein 0.54 AO353_06850 MFS transporter 0.28 16
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1698 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 0.55 PfGW456L13_1284 Putative transport protein low > 87
Marinobacter adhaerens HP15 0.57 HP15_2196 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein 0.39 HP15_407 transporter, major facilitator family low > 73

Not shown: 14 genomes with orthologs for HER17_RS20290 only; 30 genomes with orthologs for HER17_RS15900 only