Conservation of cofitness between HER17_RS20085 and HER17_RS12460 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20085 nucleoside diphosphate kinase regulator 1.0 HER17_RS12460 arginine ABC transporter permease ArtQ 0.65 14
Serratia liquefaciens MT49 0.84 IAI46_22555 nucleoside diphosphate kinase regulator 0.88 IAI46_08410 arginine ABC transporter permease ArtQ low > 86
Dickeya dadantii 3937 0.83 DDA3937_RS01505 nucleoside diphosphate kinase regulator 0.85 DDA3937_RS09505 arginine ABC transporter permease ArtQ low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS01485 nucleoside diphosphate kinase regulator 0.84 DZA65_RS09835 arginine ABC transporter permease ArtQ low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS01420 nucleoside diphosphate kinase regulator 0.84 HGI48_RS09520 arginine ABC transporter permease ArtQ low > 71
Rahnella sp. WP5 0.73 EX31_RS12330 nucleoside diphosphate kinase regulator 0.86 EX31_RS18645 arginine ABC transporter permease ArtQ low > 89
Klebsiella michiganensis M5al 0.68 BWI76_RS07955 nucleoside diphosphate kinase regulator 0.85 BWI76_RS09510 arginine transporter permease subunit ArtQ
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4522 Regulator of nucleoside diphosphate kinase 0.86 GFF770 Arginine ABC transporter, permease protein ArtQ low > 78
Escherichia coli ECRC100 0.60 OKFHMN_07485 rnk nucleoside diphosphate kinase regulator 0.88 OKFHMN_05895 artQ arginine ABC transporter permease ArtQ
Escherichia coli ECRC98 0.60 JDDGAC_11130 rnk nucleoside diphosphate kinase regulator 0.88 JDDGAC_09530 artQ arginine ABC transporter permease ArtQ low > 86
Escherichia coli ECRC62 0.60 BNILDI_21870 rnk nucleoside diphosphate kinase regulator 0.88 BNILDI_20540 artQ arginine ABC transporter permease ArtQ low > 75
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03335 nucleoside diphosphate kinase regulator 0.88 ECOLIN_RS04590 arginine ABC transporter permease ArtQ
Escherichia coli BL21 0.60 ECD_00578 regulator of nucleoside diphosphate kinase 0.88 ECD_00867 arginine ABC transporter permease
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03095 Regulator of nucleoside diphosphate kinase 0.88 OHPLBJKB_02806 Arginine ABC transporter permease protein ArtQ low > 73
Escherichia fergusonii Becca 0.60 EFB2_03482 Regulator of nucleoside diphosphate kinase 0.88 EFB2_03199 Arginine ABC transporter permease protein ArtQ low > 86
Escherichia coli ECRC101 0.60 MCAODC_26700 rnk nucleoside diphosphate kinase regulator 0.88 MCAODC_25110 artQ arginine ABC transporter permease ArtQ low > 87
Escherichia coli ECRC102 0.60 NIAGMN_05540 rnk nucleoside diphosphate kinase regulator 0.88 NIAGMN_03940 artQ arginine ABC transporter permease ArtQ
Escherichia coli ECOR38 0.60 HEPCGN_00790 rnk nucleoside diphosphate kinase regulator 0.88 HEPCGN_02115 artQ arginine ABC transporter permease ArtQ
Escherichia coli BW25113 0.60 b0610 rnk nucleoside diphosphate kinase regulator (NCBI) 0.88 b0862 artQ arginine transporter subunit (NCBI) low > 76
Escherichia coli ECOR27 0.60 NOLOHH_23860 rnk nucleoside diphosphate kinase regulator 0.88 NOLOHH_22285 artQ arginine ABC transporter permease ArtQ low > 75
Escherichia coli ECRC99 0.60 KEDOAH_20485 rnk nucleoside diphosphate kinase regulator 0.88 KEDOAH_22015 artQ arginine ABC transporter permease ArtQ
Enterobacter sp. TBS_079 0.60 MPMX20_01276 Regulator of nucleoside diphosphate kinase 0.87 MPMX20_01505 Arginine ABC transporter permease protein ArtQ low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2346 Transcription elongation factor 0.87 EX28DRAFT_2089 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_17255 nucleoside diphosphate kinase regulator 0.43 CSW01_17970 ABC transporter low > 62
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_12755 nucleoside diphosphate kinase regulator 0.35 AO356_09905 ABC transporter for L-Lysine, permease component 1 (from data) low > 104
Pseudomonas putida KT2440 0.37 PP_5223 regulator of nucleotide diphosphokinase 0.35 PP_0281 Amino acid ABC transporter, permease protein low > 96
Pseudomonas sp. RS175 0.37 PFR28_04372 Regulator of nucleoside diphosphate kinase 0.35 PFR28_04913 Arginine ABC transporter permease protein ArtQ low > 88
Pseudomonas sp. S08-1 0.37 OH686_13825 Regulator of nucleoside diphosphate kinase 0.33 OH686_14495 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) low > 80
Pseudomonas stutzeri RCH2 0.36 Psest_3761 Transcription elongation factor 0.34 Psest_0137 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.34 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.34 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family low > 86
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2178 Regulator of nucleoside diphosphate kinase 0.36 Pf1N1B4_1642 Arginine ABC transporter, permease protein ArtQ low > 87
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.40 PFLU_RS01530 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.40 PFLU_RS01530 ABC transporter permease low > 109
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_849 Regulator of nucleoside diphosphate kinase 0.35 PfGW456L13_378 Arginine ABC transporter, permease protein ArtQ low > 87
Pseudomonas simiae WCS417 0.34 PS417_27565 nucleoside diphosphate kinase regulator 0.39 PS417_01490 ABC transporter permease
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09025 nucleoside diphosphate kinase regulator 0.35 AO353_11990 ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4424 Regulator of nucleoside diphosphate kinase 0.35 Pf6N2E2_3857 Arginine ABC transporter, permease protein ArtQ low > 103

Not shown: 31 genomes with orthologs for HER17_RS20085 only; 3 genomes with orthologs for HER17_RS12460 only