Conservation of cofitness between HER17_RS00965 and HER17_RS12375 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS12375 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC 0.93 3
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.68 DZA65_RS09900 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.68 HGI48_RS09590 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.70 DDA3937_RS09575 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC low > 74
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.66 NIAGMN_03310 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.62 EX28DRAFT_2046 thiol reductant ABC exporter, CydC subunit low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.64 MPMX20_01548 putative ABC transporter ATP-binding/permease protein low > 85
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.66 HEPCGN_22920 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.66 ECD_00890 glutathione/cysteine ABC transporter export permease/ATPase — —
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.66 EFB2_03175 Lipid A export ATP-binding/permease protein MsbA — —
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.66 JDDGAC_09400 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.66 KEDOAH_22145 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.66 b0886 cydC fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) — —
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.66 MCAODC_24980 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.66 BNILDI_20415 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.66 ECOLIN_RS04715 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.66 OKFHMN_05590 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.66 OHPLBJKB_02782 Lipid A export ATP-binding/permease protein MsbA — —
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.66 NOLOHH_22160 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.64 GFF4890 Transport ATP-binding protein CydC low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.66 BWI76_RS09635 amino acid ABC transporter ATP-binding protein low > 92
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.63 IAI46_08530 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.67 EX31_RS18545 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.55 IAI47_12930 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC 0.67 12
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.57 LU632_RS09720 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.47 CSW01_05975 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC — —
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.38 Sama_2678 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.41 Shew_0614 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.43 Shewana3_0813 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.42 SO3779 cydC ABC transporter, ATP-binding protein CydC (NCBI ptt file) 0.25 66
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.19 HP15_1749 transport ATP-binding protein CydC low > 73
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.21 Xcc-8004.2335.1 Transport ATP-binding protein CydC low > 74

Not shown: 19 genomes with orthologs for HER17_RS00965 only; 2 genomes with orthologs for HER17_RS12375 only