Conservation of cofitness between HER17_RS02010 and HER17_RS11080 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02010 transcriptional regulator 1.0 HER17_RS11080 trimeric intracellular cation channel family protein 0.52 8
Dickeya dadantii 3937 0.93 DDA3937_RS19340 transcriptional regulator 0.86 DDA3937_RS10315 trimeric intracellular cation channel family protein low > 74
Dickeya dianthicola 67-19 0.92 HGI48_RS19440 transcriptional regulator 0.84 HGI48_RS10325 trimeric intracellular cation channel family protein low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS20560 transcriptional regulator 0.85 DZA65_RS10800 trimeric intracellular cation channel family protein low > 75
Rahnella sp. WP5 0.92 EX31_RS04470 transcriptional regulator 0.45 EX31_RS15790 trimeric intracellular cation channel family protein low > 89
Serratia liquefaciens MT49 0.91 IAI46_23490 transcriptional regulator 0.49 IAI46_24875 trimeric intracellular cation channel family protein low > 86
Escherichia coli ECRC99 0.89 KEDOAH_10840 yheO Uncharacterized protein YheO 0.48 KEDOAH_12570 yicG UPF0126 inner membrane protein YicG — —
Escherichia coli ECRC102 0.89 NIAGMN_15070 yheO Uncharacterized protein YheO 0.48 NIAGMN_13335 yicG UPF0126 inner membrane protein YicG — —
Escherichia coli ECRC100 0.89 OKFHMN_17300 yheO Uncharacterized protein YheO 0.48 OKFHMN_15575 yicG UPF0126 inner membrane protein YicG low > 80
Escherichia coli ECRC98 0.89 JDDGAC_20930 yheO Uncharacterized protein YheO 0.48 JDDGAC_19200 yicG UPF0126 inner membrane protein YicG low > 86
Escherichia coli ECRC101 0.89 MCAODC_07830 yheO Uncharacterized protein YheO 0.48 MCAODC_06085 yicG UPF0126 inner membrane protein YicG low > 87
Escherichia fergusonii Becca 0.89 EFB2_00477 Transcriptional regulator DauR 0.48 EFB2_00142 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00357 Transcriptional regulator DauR 0.48 OHPLBJKB_00055 hypothetical protein low > 73
Escherichia coli BL21 0.89 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.48 ECD_03503 UPF0126 family inner membrane protein low > 61
Escherichia coli BW25113 0.89 b3346 yheO orf, hypothetical protein (VIMSS) 0.48 b3646 yicG orf, hypothetical protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.89 ECOLIN_RS19165 transcriptional regulator 0.48 ECOLIN_RS20770 trimeric intracellular cation channel family protein low > 55
Escherichia coli ECRC62 0.89 BNILDI_02420 yheO Uncharacterized protein YheO 0.48 BNILDI_04060 yicG UPF0126 inner membrane protein YicG low > 75
Escherichia coli ECOR27 0.89 NOLOHH_09100 yheO Uncharacterized protein YheO 0.48 NOLOHH_07455 yicG UPF0126 inner membrane protein YicG low > 75
Escherichia coli ECOR38 0.88 HEPCGN_16130 yheO Uncharacterized protein YheO 0.48 HEPCGN_14395 yicG UPF0126 inner membrane protein YicG low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3726 YheO-like PAS domain 0.48 GFF362 Putative inner membrane protein low > 78
Klebsiella michiganensis M5al 0.88 BWI76_RS25905 hypothetical protein 0.53 BWI76_RS27405 membrane protein low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.53 EX28DRAFT_3895 Predicted membrane protein low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_04239 Transcriptional regulator DauR 0.49 MPMX20_00090 hypothetical protein low > 85
Pantoea sp. MT58 0.86 IAI47_02055 transcriptional regulator 0.49 IAI47_00530 trimeric intracellular cation channel family protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01875 hypothetical protein 0.45 CSW01_10555 hypothetical protein low > 62
Shewanella oneidensis MR-1 0.34 SO1402 conserved hypothetical protein (NCBI ptt file) 0.47 SO3342 putative transporter, required for L-alanine utilization (from data) low > 76
Shewanella sp. ANA-3 0.34 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.47 Shewana3_1204 putative transporter, required for glycine and L-alanine utilization (from data) low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2206 conserved hypothetical protein (TIGR) 0.19 DVU2672 glycine transporter (from data) low > 55
Rhizobium sp. OAE497 0.14 ABIE40_RS21180 PAS domain-containing protein 0.30 ABIE40_RS00395 trimeric intracellular cation channel family protein low > 107
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_923 YheO-like PAS domain 0.52 Pf1N1B4_1419 putative membrane protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_04640 hypothetical protein 0.51 AO353_13110 putative transporter, required for glycine utilization (from data) low > 101
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.52 Pf6N2E2_3621 putative transporter, required for glycine utilization (from data) low > 103
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_1693 YheO-like PAS domain 0.52 PfGW456L13_161 putative transporter, required for glycine utilization (from data) low > 87
Pseudomonas sp. RS175 0.12 PFR28_03547 Transcriptional regulator DauR 0.52 PFR28_05114 hypothetical protein low > 88

Not shown: 2 genomes with orthologs for HER17_RS02010 only; 58 genomes with orthologs for HER17_RS11080 only