Conservation of cofitness between HER17_RS16595 and HER17_RS10525 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16595 TerC family protein 1.0 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr 0.88 12
Dickeya dadantii 3937 0.85 DDA3937_RS04935 TerC family protein 0.97 DDA3937_RS10950 fumarate/nitrate reduction transcriptional regulator Fnr low > 74
Dickeya dianthicola 67-19 0.84 HGI48_RS04945 TerC family protein 0.97 HGI48_RS10900 fumarate/nitrate reduction transcriptional regulator Fnr low > 71
Dickeya dianthicola ME23 0.84 DZA65_RS05280 TerC family protein 0.97 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Serratia liquefaciens MT49 0.81 IAI46_20465 TerC family protein 0.94 IAI46_13260 FNR family transcription factor low > 86
Pantoea sp. MT58 0.80 IAI47_03905 TerC family protein 0.92 IAI47_09580 FNR family transcription factor low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS06090 TerC family protein 0.88 LU632_RS11420 FNR family transcription factor low > 74
Klebsiella michiganensis M5al 0.77 BWI76_RS23295 tellurium resistance protein TerC 0.95 BWI76_RS16185 transcriptional regulator FNR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1315 FIG003462: membrane protein 0.96 GFF2656 Fumarate and nitrate reduction regulatory protein low > 78
Escherichia coli ECRC62 0.75 BNILDI_10350 ygdQ UPF0053 inner membrane protein YgdQ 0.96 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.69 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00897 hypothetical protein 0.96 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein low > 73
Escherichia coli ECRC99 0.75 KEDOAH_08145 ygdQ UPF0053 inner membrane protein YgdQ 0.96 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli BW25113 0.75 b2832 ygdQ predicted inner membrane protein (NCBI) 0.96 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) low > 76
Escherichia coli ECRC101 0.75 MCAODC_10510 ygdQ UPF0053 inner membrane protein YgdQ 0.95 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECRC98 0.75 JDDGAC_23650 ygdQ UPF0053 inner membrane protein YgdQ 0.95 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 86
Escherichia coli ECOR38 0.75 HEPCGN_19240 ygdQ UPF0053 inner membrane protein YgdQ 0.96 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECOR27 0.75 NOLOHH_11870 ygdQ UPF0053 inner membrane protein YgdQ 0.96 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia fergusonii Becca 0.75 EFB2_01051 hypothetical protein 0.96 EFB2_02593 Fumarate and nitrate reduction regulatory protein low > 86
Escherichia coli ECRC100 0.75 OKFHMN_19985 ygdQ UPF0053 inner membrane protein YgdQ 0.96 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Escherichia coli Nissle 1917 0.75 ECOLIN_RS15900 TerC family protein 0.96 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr low > 55
Escherichia coli ECRC102 0.75 NIAGMN_17755 ygdQ UPF0053 inner membrane protein YgdQ 0.96 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Pseudomonas putida KT2440 0.53 PP_2445 conserved membrane protein of unknown function 0.52 PP_4265 DNA-binding transcriptional dual regulator low > 96
Echinicola vietnamensis KMM 6221, DSM 17526 0.53 Echvi_1134 Membrane protein TerC, possibly involved in tellurium resistance 0.17 Echvi_2881 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 79
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_4139 Integral membrane protein TerC 0.52 Pf6N2E2_2323 Fumarate and nitrate reduction regulatory protein low > 103
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_634 Integral membrane protein TerC 0.53 PfGW456L13_4071 Fumarate and nitrate reduction regulatory protein low > 87
Pseudomonas sp. S08-1 0.52 OH686_12060 UPF0053 inner membrane protein YgdQ 0.52 OH686_02245 Fumarate and nitrate reduction regulatory protein low > 80
Pseudomonas sp. RS175 0.52 PFR28_04647 hypothetical protein 0.53 PFR28_01079 Transcriptional activator protein Anr — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_20125 hypothetical protein 0.52 AO353_00660 transcriptional regulator low > 101
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS09110 TerC family protein 0.38 QEN71_RS36970 fumarate/nitrate reduction transcriptional regulator Fnr low > 153
Azospirillum brasilense Sp245 0.51 AZOBR_RS00970 membrane protein 0.28 AZOBR_RS01145 Crp/Fnr family transcriptional regulator low > 97
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2424 Integral membrane protein TerC 0.52 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2424 Integral membrane protein TerC 0.52 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp — —
Azospirillum sp. SherDot2 0.50 MPMX19_02317 hypothetical protein 0.27 MPMX19_00212 Nitrogen fixation regulation protein FixK low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS12740 TerC family protein 0.13 A4249_RS13080 Crp/Fnr family transcriptional regulator low > 48
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_01795 hypothetical protein 0.52 AO356_02485 transcriptional regulator 0.21 59
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3938 Integral membrane protein TerC 0.53 Pf1N1B4_3867 Fumarate and nitrate reduction regulatory protein — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS22290 membrane protein 0.38 BPHYT_RS31300 Crp/Fnr family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_01085 Membrane protein TerC, possibly involved in tellurium resistance 0.37 H281DRAFT_01640 transcriptional regulator, Crp/Fnr family low > 103
Paraburkholderia graminis OAS925 0.46 ABIE53_002234 putative tellurium resistance membrane protein TerC 0.36 ABIE53_004332 CRP/FNR family transcriptional regulator low > 113

Not shown: 5 genomes with orthologs for HER17_RS16595 only; 39 genomes with orthologs for HER17_RS10525 only