Conservation of cofitness between HER17_RS05050 and HER17_RS09270 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05050 recombination regulator RecX 1.0 HER17_RS09270 transcriptional regulator SlyA 0.81 1
Dickeya dianthicola ME23 0.57 DZA65_RS17445 recombination regulator RecX 0.88 DZA65_RS13105 transcriptional regulator SlyA low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16350 recombination regulator RecX 0.88 HGI48_RS12650 transcriptional regulator SlyA low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS16240 recombination regulator RecX 0.88 DDA3937_RS12595 transcriptional regulator SlyA low > 74
Serratia liquefaciens MT49 0.54 IAI46_03845 recombination regulator RecX 0.73 IAI46_11340 transcriptional regulator SlyA low > 86
Rahnella sp. WP5 0.49 EX31_RS07795 recombination regulator RecX 0.70 EX31_RS13775 transcriptional regulator SlyA low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01036 Regulatory protein RecX 0.74 OHPLBJKB_02083 Transcriptional regulator SlyA low > 73
Escherichia coli ECRC101 0.47 MCAODC_11235 recX recombination regulator RecX 0.73 MCAODC_17935 slyA transcriptional regulator SlyA low > 87
Escherichia coli ECOR27 0.47 NOLOHH_12550 recX recombination regulator RecX 0.73 NOLOHH_17995 slyA transcriptional regulator SlyA — —
Escherichia coli BW25113 0.47 b2698 recX RecA regulator RecX (NCBI) 0.74 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) low > 76
Escherichia coli ECRC99 0.47 KEDOAH_07425 recX recombination regulator RecX 0.73 KEDOAH_00630 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC98 0.47 JDDGAC_24375 recX recombination regulator RecX 0.73 JDDGAC_02065 slyA transcriptional regulator SlyA low > 86
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15055 recombination regulator RecX 0.74 ECOLIN_RS09160 transcriptional regulator SlyA — —
Escherichia coli ECRC102 0.47 NIAGMN_18480 recX recombination regulator RecX 0.73 NIAGMN_00590 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC100 0.47 OKFHMN_20710 recX recombination regulator RecX 0.73 OKFHMN_27475 slyA transcriptional regulator SlyA — —
Escherichia coli BL21 0.47 ECD_02548 regulatory protein for RecA 0.74 ECD_01612 global transcriptional regulator — —
Escherichia fergusonii Becca 0.47 EFB2_01226 Regulatory protein RecX 0.73 EFB2_02350 Transcriptional regulator SlyA low > 86
Enterobacter sp. TBS_079 0.47 MPMX20_03579 Regulatory protein RecX 0.73 MPMX20_01995 Transcriptional regulator SlyA low > 85
Escherichia coli ECRC62 0.47 BNILDI_11110 recX recombination regulator RecX 0.73 BNILDI_16785 slyA transcriptional regulator SlyA low > 75
Escherichia coli ECOR38 0.47 HEPCGN_19905 recX recombination regulator RecX 0.72 HEPCGN_05860 slyA transcriptional regulator SlyA low > 87
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria 0.73 EX28DRAFT_1639 Transcriptional regulators — —
Pantoea sp. MT58 0.45 IAI47_04305 regulatory protein RecX 0.74 IAI47_10720 transcriptional regulator SlyA 0.21 14
Klebsiella michiganensis M5al 0.43 BWI76_RS22175 recombination regulator RecX 0.72 BWI76_RS16435 SlyA family transcriptional regulator — —
Erwinia tracheiphila SCR3 0.40 LU632_RS15730 recombination regulator RecX 0.70 LU632_RS11240 slyA transcriptional regulator SlyA — —
Pseudomonas sp. S08-1 0.26 OH686_18210 Regulatory protein RecX 0.30 OH686_20685 Transcriptional regulator SlyA — —
Shewanella loihica PV-4 0.25 Shew_1216 regulatory protein RecX (RefSeq) 0.36 Shew_1782 MarR family transcriptional regulator (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.24 PFLU_RS05890 recombination regulator RecX 0.33 PFLU_RS21915 MarR family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS05890 recombination regulator RecX 0.33 PFLU_RS21915 MarR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_05665 recombinase RecX 0.31 AO356_04045 MarR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16810 recombinase RecX 0.32 AO353_18435 MarR family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.23 PFR28_00473 Regulatory protein RecX 0.31 PFR28_00789 Transcriptional regulator SlyA — —
Pseudomonas stutzeri RCH2 0.23 Psest_2871 Uncharacterized protein conserved in bacteria 0.31 Psest_1870 Transcriptional regulators — —
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2992 Regulatory protein RecX 0.31 Pf6N2E2_2644 Transcriptional regulator SlyA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1379 Regulatory protein RecX 0.32 Psyr_3737 transcriptional regulator, MarR family — —
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1379 Regulatory protein RecX 0.32 Psyr_3737 transcriptional regulator, MarR family low > 86
Pseudomonas putida KT2440 0.22 PP_1630 Regulatory protein RecX 0.31 PP_4515 Transcriptional regulator, MarR family low > 96

Not shown: 17 genomes with orthologs for HER17_RS05050 only; 14 genomes with orthologs for HER17_RS09270 only