Conservation of cofitness between HER17_RS11620 and HER17_RS08935 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11620 NUDIX hydrolase 1.0 HER17_RS08935 Fe-S cluster assembly protein SufD 0.79 10
Escherichia coli BL21 0.78 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.55 ECD_01650 component of SufBCD Fe-S cluster assembly scaffold — —
Escherichia coli ECOR38 0.78 HEPCGN_24225 nudJ phosphatase NudJ 0.55 HEPCGN_05650 sufD Fe-S cluster assembly protein SufD low > 87
Escherichia coli ECRC98 0.78 JDDGAC_06615 nudJ phosphatase NudJ 0.54 JDDGAC_01840 sufD Fe-S cluster assembly protein SufD low > 86
Escherichia coli ECRC62 0.78 BNILDI_19060 nudJ phosphatase NudJ 0.55 BNILDI_16575 sufD Fe-S cluster assembly protein SufD low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06630 phosphatase NudJ 0.54 ECOLIN_RS09400 Fe-S cluster assembly protein SufD — —
Escherichia fergusonii Becca 0.78 EFB2_02841 Phosphatase NudJ 0.55 EFB2_02311 FeS cluster assembly protein SufD low > 86
Escherichia coli ECOR27 0.78 NOLOHH_20895 nudJ phosphatase NudJ 0.55 NOLOHH_17785 sufD Fe-S cluster assembly protein SufD low > 75
Escherichia coli ECRC100 0.78 OKFHMN_00750 nudJ phosphatase NudJ 0.54 OKFHMN_27265 sufD Fe-S cluster assembly protein SufD low > 80
Escherichia coli ECRC101 0.78 MCAODC_22335 nudJ phosphatase NudJ 0.54 MCAODC_18145 sufD Fe-S cluster assembly protein SufD low > 87
Escherichia coli ECRC99 0.78 KEDOAH_24835 nudJ phosphatase NudJ 0.54 KEDOAH_00845 sufD Fe-S cluster assembly protein SufD — —
Escherichia coli ECRC102 0.78 NIAGMN_24895 nudJ phosphatase NudJ 0.54 NIAGMN_00800 sufD Fe-S cluster assembly protein SufD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02534 Phosphatase NudJ 0.55 OHPLBJKB_02043 FeS cluster assembly protein SufD low > 73
Escherichia coli BW25113 0.78 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.55 b1681 sufD component of SufBCD complex (NCBI) low > 76
Serratia liquefaciens MT49 0.77 IAI46_10445 NUDIX hydrolase 0.64 IAI46_11160 Fe-S cluster assembly protein SufD low > 86
Dickeya dadantii 3937 0.77 DDA3937_RS11480 NUDIX hydrolase 0.64 DDA3937_RS12765 Fe-S cluster assembly protein SufD low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS11525 NUDIX hydrolase 0.64 HGI48_RS12830 Fe-S cluster assembly protein SufD low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS11860 NUDIX hydrolase 0.64 DZA65_RS13295 Fe-S cluster assembly protein SufD low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.57 GFF3561 Iron-sulfur cluster assembly protein SufD low > 78
Klebsiella michiganensis M5al 0.75 BWI76_RS11320 NUDIX hydrolase 0.57 BWI76_RS16985 signal peptide peptidase SppA — —
Enterobacter sp. TBS_079 0.71 MPMX20_01818 Phosphatase NudJ 0.56 MPMX20_01946 FeS cluster assembly protein SufD low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS14570 NUDIX hydrolase 0.60 LU632_RS11070 sufD Fe-S cluster assembly protein SufD — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.57 EX28DRAFT_1684 FeS assembly protein SufD low > 76
Rahnella sp. WP5 0.71 EX31_RS24580 NUDIX hydrolase 0.63 EX31_RS13895 Fe-S cluster assembly protein SufD — —
Pantoea sp. MT58 0.65 IAI47_11910 NUDIX hydrolase 0.60 IAI47_10865 Fe-S cluster assembly protein SufD — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_06880 Phosphatase NudJ 0.21 OKGIIK_09955 sufD Fe-S cluster assembly protein SufD — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2757.1 Nudix-like NDP and NTP phosphohydrolase YmfB 0.23 Xcc-8004.1698.1 Iron-sulfur cluster assembly protein SufD — —
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00430 NUDIX hydrolase 0.22 LRK54_RS03085 Fe-S cluster assembly protein SufD — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00170 NUDIX hydrolase 0.22 LRK55_RS02835 Fe-S cluster assembly protein SufD — —
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS02190 NUDIX hydrolase 0.18 ABZR86_RS09465 Fe-S cluster assembly protein SufD — —
Marinobacter adhaerens HP15 0.32 HP15_2085 MutT/nudix family protein 0.21 HP15_2986 FeS assembly protein SufD — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27700 NUDIX hydrolase 0.22 AO353_24930 Fe-S cluster assembly protein SufD low > 101
Lysobacter sp. OAE881 0.26 ABIE51_RS11505 NUDIX hydrolase 0.21 ABIE51_RS15740 Fe-S cluster assembly protein SufD — —

Not shown: 35 genomes with orthologs for HER17_RS11620 only; 25 genomes with orthologs for HER17_RS08935 only