| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS10320 | | flavin reductase | 1.0 | HER17_RS07120 | | transcriptional regulator LrhA | 0.65 | 16 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_09030 | | pyrimidine utilization flavin reductase protein F | 0.70 | IAI46_17715 | | transcriptional regulator LrhA | low | > 86 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01694 | | FMN reductase (NADH) RutF | 0.62 | MPMX20_03219 | | HTH-type transcriptional regulator HdfR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1919 | | pyrimidine utilization flavin reductase protein F | 0.64 | EX28DRAFT_0320 | | Transcriptional regulator | low | > 76 |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_23500 | rutF | malonic semialdehyde reductase | 0.62 | HEPCGN_22035 | lrhA | transcriptional regulator LrhA | low | > 87 |
| Escherichia coli ECRC62 | 0.53 | BNILDI_19705 | rutF | malonic semialdehyde reductase | 0.62 | BNILDI_13370 | lrhA | transcriptional regulator LrhA | low | > 75 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_23105 | rutF | malonic semialdehyde reductase | 0.62 | KEDOAH_05365 | lrhA | transcriptional regulator LrhA | — | — |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_08250 | rutF | malonic semialdehyde reductase | 0.62 | JDDGAC_26795 | lrhA | transcriptional regulator LrhA | low | > 86 |
| Escherichia fergusonii Becca | 0.53 | EFB2_03073 | | FMN reductase (NADH) RutF | 0.62 | EFB2_01569 | | HTH-type transcriptional regulator HdfR | low | > 86 |
| Escherichia coli BL21 | 0.53 | ECD_01010 | | flavin:NADH reductase | 0.62 | ECD_02214 | | transcriptional repressor of flagellar, motility and chemotaxis genes | — | — |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_21540 | rutF | malonic semialdehyde reductase | 0.62 | NOLOHH_14450 | lrhA | transcriptional regulator LrhA | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_02659 | | FMN reductase (NADH) RutF | 0.62 | OHPLBJKB_01416 | | HTH-type transcriptional regulator HdfR | low | > 73 |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS26450 | | NADH-dependent FMN reductase RutF | 0.60 | ECOLIN_RS13290 | | transcriptional regulator LrhA | — | — |
| Escherichia coli BW25113 | 0.53 | b1007 | b1007 | orf, hypothetical protein (VIMSS) | 0.62 | b2289 | lrhA | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.53 | MCAODC_24025 | rutF | pyrimidine utilization flavin reductase protein F | 0.62 | MCAODC_13870 | lrhA | transcriptional regulator LrhA | low | > 87 |
| Escherichia coli ECRC100 | 0.53 | OKFHMN_04640 | rutF | pyrimidine utilization flavin reductase protein F | 0.62 | OKFHMN_22830 | lrhA | transcriptional regulator LrhA | low | > 80 |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_23695 | rutF | pyrimidine utilization flavin reductase protein F | 0.62 | NIAGMN_20600 | lrhA | transcriptional regulator LrhA | — | — |
| Pantoea sp. MT58 | 0.52 | IAI47_12530 | | pyrimidine utilization flavin reductase protein F | 0.69 | IAI47_06355 | | transcriptional regulator LrhA | low | > 76 |
| Variovorax sp. SCN45 | 0.52 | GFF3714 | | FMN reductase (NADH) RutF (EC 1.5.1.42) | 0.37 | GFF1753 | | LysR family transcriptional regulator lrhA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_0995 | | Flavin reductase-like protein | 0.25 | Psyr_3624 | | transcriptional regulator, LysR family | low | > 86 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS10755 | | pyrimidine utilization flavin reductase protein F | 0.55 | BWI76_RS20200 | | transcriptional regulator LrhA | low | > 92 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_0995 | | Flavin reductase-like protein | 0.25 | Psyr_3624 | | transcriptional regulator, LysR family | low | > 86 |
| Agrobacterium fabrum C58 | 0.48 | Atu2495 | | flavoprotein oxidoreductase | 0.27 | Atu0654 | | transcriptional regulator, LysR family | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.47 | MIT1002_03463 | | FMN reductase (NADH) RutF | 0.21 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | low | > 70 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS07485 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component | 0.23 | QEN71_RS32260 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_3748 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) | 0.26 | PfGW456L13_2241 | | Transcriptional regulator, LysR family | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3275 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) | 0.64 | GFF1893 | | LysR family transcriptional regulator lrhA | 0.40 | 78 |
| Bosea sp. OAE506 | 0.34 | ABIE41_RS13660 | | flavin reductase family protein | 0.26 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | low | > 77 |
| Paraburkholderia graminis OAS925 | 0.32 | ABIE53_004540 | | flavin reductase (NADH) | 0.23 | ABIE53_004884 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Rhizobium sp. OAE497 | 0.31 | ABIE40_RS10095 | | flavin reductase | 0.27 | ABIE40_RS16120 | | LysR substrate-binding domain-containing protein | — | — |
| Sinorhizobium meliloti 1021 | 0.29 | SMc00514 | | monooxygenase | 0.26 | SMc00820 | | transcriptional regulator | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_013510 | | flavin reductase family protein | 0.22 | TX73_013870 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_02021 | | FMN reductase (NADH) RutF | 0.25 | PFR28_00975 | | HTH-type transcriptional regulator HdfR | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS31995 | | flavin reductase | 0.44 | RR42_RS30590 | | LysR family transcriptional regulator | low | > 128 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_02358 | | FMN reductase | 0.23 | CCNA_03625 | | transcriptional regulator CztR | 0.55 | 57 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_02358 | | FMN reductase | 0.23 | CCNA_03625 | | transcriptional regulator CztR | low | > 66 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_17920 | | nitrilotriacetate monooxygenase | 0.24 | PS417_08510 | | LysR family transcriptional regulator | low | > 88 |
| Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS20045 | | flavin reductase | 0.25 | AZOBR_RS00870 | | LysR family transcriptional regulator | low | > 97 |
| Dechlorosoma suillum PS | 0.19 | Dsui_1004 | | conserved protein of DIM6/NTAB family | 0.24 | Dsui_1371 | | transcriptional regulator | low | > 51 |
Not shown: 7 genomes with orthologs for HER17_RS10320 only; 24 genomes with orthologs for HER17_RS07120 only