Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 1.0 | HER17_RS06305 | | two-component system sensor histidine kinase BaeS | 0.53 | 20 |
Rahnella sp. WP5 | 0.80 | EX31_RS08010 | | TRAP transporter substrate-binding protein | 0.64 | EX31_RS20310 | | two-component system sensor histidine kinase BaeS | low | > 89 |
Enterobacter sp. TBS_079 | 0.75 | MPMX20_04349 | | Solute-binding protein | 0.63 | MPMX20_03064 | | Signal transduction histidine-protein kinase BaeS | 0.17 | 50 |
Pantoea sp. MT58 | 0.66 | IAI47_03230 | | TRAP transporter substrate-binding protein | 0.64 | IAI47_06855 | | two-component system sensor histidine kinase BaeS | low | > 76 |
Pseudomonas simiae WCS417 | 0.49 | PS417_17370 | | C4-dicarboxylate ABC transporter | 0.44 | PS417_18295 | | histidine kinase | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_487 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.44 | Pf6N2E2_220 | | Sensory histidine kinase BaeS | low | > 103 |
Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.43 | PFLU_RS20145 | | sensor histidine kinase efflux regulator BaeS | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.43 | PFLU_RS20145 | | sensor histidine kinase efflux regulator BaeS | low | > 109 |
Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.41 | Psyr_2867 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.41 | Psyr_2867 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_23055 | | C4-dicarboxylate ABC transporter | 0.43 | AO356_00705 | | histidine kinase | low | > 104 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF797 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.23 | GFF3899 | | Sensory histidine kinase BaeS | low | > 90 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_03838 | | Solute-binding protein | 0.63 | OHPLBJKB_01626 | | Signal transduction histidine-protein kinase BaeS | low | > 73 |
Escherichia coli ECRC62 | 0.29 | BNILDI_07130 | | Bacterial extracellular solute-binding protein, family 7 | 0.63 | BNILDI_14440 | baeS | two-component system sensor histidine kinase BaeS | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF3130 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.64 | GFF3851 | | Sensory histidine kinase BaeS | low | > 78 |
Klebsiella michiganensis M5al | 0.29 | BWI76_RS24125 | | hypothetical protein | 0.60 | BWI76_RS19270 | | two-component sensor histidine kinase | low | > 92 |
Variovorax sp. SCN45 | 0.28 | GFF2918 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.42 | GFF5988 | | Sensory histidine kinase BaeS | low | > 127 |
Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS17380 | | TRAP transporter substrate-binding protein | 0.63 | ECOLIN_RS12215 | | two-component system sensor histidine kinase BaeS | — | — |
Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS21090 | | TRAP transporter substrate-binding protein | 0.39 | ABZR87_RS19180 | | ATP-binding protein | low | > 80 |
Serratia liquefaciens MT49 | 0.27 | IAI46_00375 | | TRAP transporter substrate-binding protein | 0.70 | IAI46_18990 | | two-component system sensor histidine kinase BaeS | low | > 86 |
Escherichia coli ECOR27 | 0.26 | NOLOHH_11100 | | Bacterial extracellular solute-binding protein, family 7 | 0.63 | NOLOHH_15525 | baeS | two-component system sensor histidine kinase BaeS | low | > 75 |
Escherichia coli ECOR38 | 0.26 | HEPCGN_18535 | | Bacterial extracellular solute-binding protein, family 7 | 0.63 | HEPCGN_02870 | baeS | two-component system sensor histidine kinase BaeS | low | > 87 |
Escherichia fergusonii Becca | 0.24 | EFB2_00227 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | 0.63 | EFB2_01777 | | Signal transduction histidine-protein kinase BaeS | low | > 86 |
Escherichia coli BL21 | 0.24 | ECD_03431 | | 2,3-diketo-L-gulonate-binding periplasmic protein | 0.63 | ECD_01983 | | sensory histidine kinase in two-component regulatory system with BaeR | low | > 61 |
Escherichia coli BW25113 | 0.24 | b3579 | yiaO | predicted transporter (NCBI) | 0.63 | b2078 | baeS | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | low | > 76 |
Castellaniella sp019104865 MT123 | 0.23 | ABCV34_RS11540 | | TRAP transporter substrate-binding protein | 0.37 | ABCV34_RS02925 | | sensor histidine kinase efflux regulator BaeS | low | > 48 |
Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | 0.39 | HSERO_RS23065 | | psensor histidine kinase | low | > 78 |
Not shown: 33 genomes with orthologs for HER17_RS19675 only; 16 genomes with orthologs for HER17_RS06305 only