Conservation of cofitness between HER17_RS05585 and HER17_RS06275 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05585 DNA/RNA nuclease SfsA 1.0 HER17_RS06275 lipid kinase YegS 0.60 16
Serratia liquefaciens MT49 0.75 IAI46_21205 DNA/RNA nuclease SfsA 0.66 IAI46_19020 lipid kinase YegS low > 86
Rahnella sp. WP5 0.71 EX31_RS03245 DNA/RNA nuclease SfsA 0.68 EX31_RS20330 lipid kinase YegS low > 89
Pantoea sp. MT58 0.67 IAI47_15630 DNA/RNA nuclease SfsA 0.63 IAI47_06840 lipid kinase YegS low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_00832 Sugar fermentation stimulation protein A 0.62 MPMX20_03070 putative lipid kinase YegS low > 85
Erwinia tracheiphila SCR3 0.67 LU632_RS20075 sfsA DNA/RNA nuclease SfsA 0.65 LU632_RS08660 yegS lipid kinase YegS 0.45 57
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.61 NOLOHH_15485 yegS lipid kinase YegS low > 75
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.61 MCAODC_21005 yegS lipid kinase YegS low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.61 OHPLBJKB_01621 Lipid kinase YegS low > 73
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.61 KEDOAH_04000 yegS lipid kinase YegS — —
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.61 b2086 yegS hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.66 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.61 ECOLIN_RS12265 lipid kinase YegS — —
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.61 ECD_02015 phosphatidylglycerol kinase, metal-dependent — —
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.61 OKFHMN_24150 yegS lipid kinase YegS low > 80
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.61 BNILDI_14400 yegS lipid kinase YegS low > 75
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.61 JDDGAC_28260 yegS lipid kinase YegS low > 86
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.61 NIAGMN_22095 yegS lipid kinase YegS — —
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.61 HEPCGN_02830 yegS lipid kinase YegS low > 87
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.61 EFB2_01768 Lipid kinase YegS low > 86
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3735 sugar fermentation stimulation protein 0.62 EX28DRAFT_0475 lipid kinase YegS low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS05020 sugar fermentation stimulation protein SfsA 0.61 BWI76_RS19285 lipid kinase YegS low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.61 GFF3840 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 78
Shewanella loihica PV-4 0.56 Shew_3128 sugar fermentation stimulation protein (RefSeq) 0.28 Shew_3345 lipid kinase (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.40 Psyr_3300 Conserved hypothetical protein 147 low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.40 Psyr_3300 Conserved hypothetical protein 147 low > 86
Pseudomonas stutzeri RCH2 0.45 Psest_1005 sugar fermentation stimulation protein 0.37 Psest_1841 lipid kinase YegS low > 67
Pseudomonas putida KT2440 0.44 PP_4691 sugar fermentation stimulation protein A 0.41 PP_2125 lipid kinase low > 96
Pseudomonas sp. RS175 0.44 PFR28_03712 Sugar fermentation stimulation protein A 0.38 PFR28_01008 putative lipid kinase YegS low > 88
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5162 Sugar/maltose fermentation stimulation protein homolog 0.39 Pf6N2E2_2419 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16105 XRE family transcriptional regulator 0.37 AO356_02970 lipid kinase 0.24 68
Pseudomonas fluorescens SBW25 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.38 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas sp. S08-1 0.43 OH686_17290 sugar fermentation stimulation protein 0.38 OH686_21825 lipid kinase YegS low > 80
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.38 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2864 Sugar/maltose fermentation stimulation protein homolog 0.39 Pf1N1B4_233 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 87
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1530 Sugar/maltose fermentation stimulation protein homolog 0.39 PfGW456L13_2276 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 87
Pseudomonas simiae WCS417 0.41 PS417_23865 XRE family transcriptional regulator 0.38 PS417_19635 lipid kinase low > 88

Not shown: 24 genomes with orthologs for HER17_RS05585 only; 3 genomes with orthologs for HER17_RS06275 only