Conservation of cofitness between HER17_RS19710 and HER17_RS06080 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19710 alcohol dehydrogenase 1.0 HER17_RS06080 nucleoside-diphosphate kinase 0.53 8
Serratia liquefaciens MT49 0.81 IAI46_21750 alcohol dehydrogenase 0.89 IAI46_19295 nucleoside-diphosphate kinase low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS01800 alcohol dehydrogenase 0.91 DDA3937_RS15485 nucleoside-diphosphate kinase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01695 alcohol dehydrogenase 0.90 HGI48_RS15595 nucleoside-diphosphate kinase
Dickeya dianthicola ME23 0.81 DZA65_RS01770 alcohol dehydrogenase 0.90 DZA65_RS16670 nucleoside-diphosphate kinase low > 75
Enterobacter sp. TBS_079 0.76 MPMX20_03855 Alcohol dehydrogenase YqhD 0.80 MPMX20_03396 Nucleoside diphosphate kinase low > 85
Escherichia coli ECOR38 0.76 HEPCGN_17810 yqhD alcohol dehydrogenase 0.80 HEPCGN_20825 ndk nucleoside-diphosphate kinase low > 87
Escherichia coli BL21 0.76 ECD_02884 aldehyde reductase, NADPH-dependent 0.80 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase low > 61
Escherichia coli ECRC62 0.76 BNILDI_00795 yqhD alcohol dehydrogenase 0.80 BNILDI_12155 ndk nucleoside-diphosphate kinase low > 75
Escherichia fergusonii Becca 0.76 EFB2_00799 Alcohol dehydrogenase YqhD 0.80 EFB2_01372 Nucleoside diphosphate kinase low > 86
Escherichia coli BW25113 0.76 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.80 b2518 ndk nucleoside diphosphate kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 0.80 OHPLBJKB_01191 Nucleoside diphosphate kinase low > 73
Klebsiella michiganensis M5al 0.76 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.80 BWI76_RS21100 nucleoside-diphosphate kinase low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.80 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) low > 76
Escherichia coli ECRC101 0.76 MCAODC_09460 yqhD alcohol dehydrogenase 0.80 MCAODC_12235 ndk nucleoside-diphosphate kinase low > 87
Escherichia coli ECRC99 0.76 KEDOAH_09200 yqhD alcohol dehydrogenase 0.80 KEDOAH_06515 ndk nucleoside-diphosphate kinase
Escherichia coli ECRC100 0.76 OKFHMN_18945 yqhD alcohol dehydrogenase 0.80 OKFHMN_21705 ndk nucleoside-diphosphate kinase low > 80
Escherichia coli ECRC98 0.76 JDDGAC_22580 yqhD alcohol dehydrogenase 0.80 JDDGAC_25380 ndk nucleoside-diphosphate kinase low > 86
Escherichia coli ECRC102 0.76 NIAGMN_16710 yqhD alcohol dehydrogenase 0.80 NIAGMN_19475 ndk nucleoside-diphosphate kinase
Escherichia coli ECOR27 0.76 NOLOHH_10720 yqhD alcohol dehydrogenase 0.80 NOLOHH_13355 ndk nucleoside-diphosphate kinase low > 75
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17335 alcohol dehydrogenase 0.80 ECOLIN_RS14305 nucleoside-diphosphate kinase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.81 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) low > 78
Pseudomonas putida KT2440 0.63 PP_2492 alcohol dehydrogenase, NAD(P)-dependent 0.65 PP_0849 Nucleoside diphosphate kinase
Acinetobacter radioresistens SK82 0.62 MPMX26_00884 Alcohol dehydrogenase YqhD 0.66 MPMX26_00425 Nucleoside diphosphate kinase
Alteromonas macleodii MIT1002 0.60 MIT1002_02460 Alcohol dehydrogenase YqhD 0.75 MIT1002_02793 Nucleoside diphosphate kinase
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4515 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) 0.60 Ac3H11_1790 Nucleoside diphosphate kinase (EC 2.7.4.6)
Shewanella sp. ANA-3 0.58 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq) 0.71 Shewana3_2272 nucleoside diphosphate kinase (RefSeq)
Shewanella oneidensis MR-1 0.58 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) 0.70 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file)
Pontibacter actiniarum KMM 6156, DSM 19842 0.58 CA264_07375 NADH-dependent alcohol dehydrogenase 0.48 CA264_18820 nucleoside-diphosphate kinase
Shewanella loihica PV-4 0.52 Shew_0070 iron-containing alcohol dehydrogenase (RefSeq) 0.74 Shew_2310 nucleoside-diphosphate kinase (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2201 b3011 alcohol dehydrogenase, iron-containing (TIGR) 0.57 DVU2333 ndk nucleoside diphosphate kinase (TIGR) low > 55
Bacteroides ovatus ATCC 8483 0.49 BACOVA_03776 alcohol dehydrogenase, iron-dependent 0.35 BACOVA_01151 nucleoside diphosphate kinase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.48 BT0535 iron-containing alcohol dehydrogenase (NCBI ptt file) 0.35 BT3925 nucleoside diphosphate kinase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.48 HMPREF1058_RS00185 iron-containing alcohol dehydrogenase 0.36 HMPREF1058_RS08290 nucleoside-diphosphate kinase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.48 Echvi_1168 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.46 Echvi_0995 Nucleoside diphosphate kinase
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS01085 iron-containing alcohol dehydrogenase 0.36 ABI39_RS02465 nucleoside-diphosphate kinase low > 72
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.67 CSW01_03925 nucleoside-diphosphate kinase
Pseudomonas sp. S08-1 0.44 OH686_06550 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.65 OH686_17510 Nucleoside diphosphate kinase
Dechlorosoma suillum PS 0.26 Dsui_2116 Fe-dependent oxidoreductase, alcohol dehydrogenase 0.62 Dsui_3146 nucleoside diphosphate kinase

Not shown: 3 genomes with orthologs for HER17_RS19710 only; 61 genomes with orthologs for HER17_RS06080 only