Conservation of cofitness between HER17_RS00965 and HER17_RS05925 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS05925 two-component system response regulator GlrR 0.95 2
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.91 DZA65_RS16815 two-component system response regulator GlrR low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.91 HGI48_RS15735 two-component system response regulator GlrR low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.91 DDA3937_RS15640 two-component system response regulator GlrR low > 74
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.85 HEPCGN_20640 qseF two-component system response regulator QseF/GlrR 0.94 4
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.85 b2554 yfhA predicted DNA-binding response regulator in two-component system (NCBI) low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.89 MPMX20_03423 Transcriptional regulatory protein QseF low > 85
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.85 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR low > 80
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.85 EFB2_01342 Transcriptional regulatory protein QseF low > 86
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.85 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR low > 86
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.85 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.85 ECD_02446 response regulator regulating glmY sRNA in two-component system with sensor protein GlrK low > 61
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.85 BNILDI_11970 qseF two-component system response regulator QseF/GlrR low > 75
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.89 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.85 ECOLIN_RS14455 two-component system response regulator GlrR 0.54 55
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.85 MCAODC_12025 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.85 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.85 OHPLBJKB_01153 Transcriptional regulatory protein GlrR low > 73
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.85 NOLOHH_13170 qseF two-component system response regulator QseF/GlrR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.88 GFF2455 Putative sensory histidine kinase YfhA low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.86 BWI76_RS21250 two-component system response regulator GlrR 0.52 48
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.92 IAI46_19460 two-component system response regulator GlrR low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.89 EX31_RS20615 two-component system response regulator GlrR low > 89
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.87 LU632_RS17930 glrR two-component system response regulator GlrR low > 74
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.83 IAI47_04945 two-component system response regulator GlrR low > 76
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.35 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1831 transcriptional regulator, TetR family 0.30 B158DRAFT_0521 PEP-CTERM-box response regulator transcription factor low > 40
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.35 HP15_523 two component, sigma54 specific, transcriptional regulator, Fis family low > 73
Alteromonas macleodii MIT1002 0.55 MIT1002_03371 HTH-type transcriptional repressor FabR 0.62 MIT1002_01326 Quorum-sensing regulator protein F low > 70
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.30 Xcc-8004.1353.1 Type IV fimbriae expression regulatory protein PilR low > 74
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.34 OH686_16390 Type IV fimbriae expression regulatory protein PilR low > 80
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.34 Pf1N1B4_2818 Type IV fimbriae expression regulatory protein PilR low > 87
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.33 PFR28_03751 Regulatory protein AtoC low > 88
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.33 PP_4371 two component system AtoC DNA-binding transcriptional activator low > 96
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.34 AO356_15905 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.34 Pf6N2E2_5122 Type IV fimbriae expression regulatory protein PilR low > 103
Pseudomonas simiae WCS417 0.27 PS417_02720 TetR family transcriptional regulator 0.37 PS417_05525 Fis family transcriptional regulator low > 88
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11410 TetR family transcriptional regulator 0.34 BPHYT_RS30045 ATPase AAA low > 109

Not shown: 13 genomes with orthologs for HER17_RS00965 only; 19 genomes with orthologs for HER17_RS05925 only