Conservation of cofitness between HER17_RS04235 and HER17_RS05670 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 1.0 HER17_RS05670 sulfate ABC transporter substrate-binding protein 0.94 11
Dickeya dadantii 3937 0.80 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.90 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein 0.74 74
Dickeya dianthicola 67-19 0.79 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.89 HGI48_RS15990 sulfate ABC transporter substrate-binding protein 0.84 23
Dickeya dianthicola ME23 0.79 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.89 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Serratia liquefaciens MT49 0.78 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.57 IAI46_24640 sulfate ABC transporter substrate-binding protein 0.65 19
Pantoea sp. MT58 0.78 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.58 IAI47_00785 sulfate ABC transporter substrate-binding protein low > 76
Rahnella sp. WP5 0.77 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.54 EX31_RS14305 sulfate ABC transporter substrate-binding protein low > 89
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.60 EX28DRAFT_4391 sulfate/thiosulfate-binding protein low > 76
Escherichia coli ECRC62 0.75 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.60 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Escherichia coli ECOR27 0.75 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.60 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Escherichia coli BW25113 0.75 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.60 b3917 sbp sulfate transporter subunit (NCBI) low > 76
Escherichia coli BL21 0.75 ECD_02609 sulfite reductase, alpha subunit, flavoprotein 0.60 ECD_03802 sulfate transporter subunit low > 61
Enterobacter sp. TBS_079 0.75 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.59 MPMX20_04551 Sulfate-binding protein low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component 0.60 OHPLBJKB_04134 Sulfate-binding protein low > 73
Escherichia coli Nissle 1917 0.75 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.60 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 55
Escherichia fergusonii Becca 0.75 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component 0.60 EFB2_04701 Sulfate-binding protein low > 86
Escherichia coli ECOR38 0.75 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.60 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Klebsiella michiganensis M5al 0.74 BWI76_RS22765 sulfite reductase subunit alpha 0.58 BWI76_RS27500 sulfate transporter subunit low > 92
Escherichia coli ECRC98 0.74 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.59 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 86
Escherichia coli ECRC100 0.74 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.59 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 80
Escherichia coli ECRC101 0.74 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.59 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Escherichia coli ECRC102 0.74 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.59 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp
Escherichia coli ECRC99 0.74 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.59 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.59 GFF2284 Sulfate-binding protein Sbp low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.56 LU632_RS21830 sulfate ABC transporter substrate-binding protein low > 74
Shewanella oneidensis MR-1 0.49 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.62 SO4652 sbp sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.43 ABIE51_RS15825 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.54 ABIE51_RS01855 sulfate ABC transporter substrate-binding protein 0.96 30
Castellaniella sp019104865 MT123 0.39 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.53 ABCV34_RS03935 sulfate ABC transporter substrate-binding protein low > 48
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.59 OKGIIK_10935 ABC transporter permease low > 52
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05905 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.55 ABZR86_RS02880 sulfate ABC transporter substrate-binding protein 0.97 7
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1258.1 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.56 Xcc-8004.4087.1 Sulfate and thiosulfate binding protein CysP 0.92 6
Agrobacterium fabrum C58 0.32 Atu0146 sulfite reductase (NADPH) flavoprotein alpha-component 0.61 Atu0820 ABC transporter, substrate binding protein (sulfate) low > 89
Pseudomonas stutzeri RCH2 0.13 Psest_3345 Sulfite reductase, alpha subunit (flavoprotein) 0.69 Psest_4060 sulfate/thiosulfate-binding protein low > 67
Caulobacter crescentus NA1000 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.59 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 66
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.59 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 67

Not shown: 8 genomes with orthologs for HER17_RS04235 only; 39 genomes with orthologs for HER17_RS05670 only