Conservation of cofitness between HER17_RS12330 and HER17_RS05370 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12330 LysR family transcriptional regulator 1.0 HER17_RS05370 two-component system response regulator BtsR 0.90 19
Dickeya dianthicola ME23 0.73 DZA65_RS09965 LysR family transcriptional regulator 0.59 DZA65_RS17550 two-component system response regulator BtsR low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS09645 LysR family transcriptional regulator 0.59 DDA3937_RS16365 two-component system response regulator BtsR low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS09655 LysR family transcriptional regulator 0.59 HGI48_RS16465 two-component system response regulator BtsR low > 71
Pseudomonas sp. RS175 0.23 PFR28_00779 hypothetical protein 0.18 PFR28_04366 Sensory transduction protein LytR low > 88
Pseudomonas fluorescens SBW25 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.18 PFLU_RS29215 response regulator transcription factor low > 109
Pseudomonas simiae WCS417 0.23 PS417_20175 LysR family transcriptional regulator 0.18 PS417_27535 chemotaxis protein CheY low > 88
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_524 Transcriptional regulator GbuR 0.19 Pf1N1B4_2184 Autolysis response regulater LytR low > 87
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.18 PFLU_RS29215 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04090 LysR family transcriptional regulator 0.18 AO356_12785 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2654 Transcriptional regulator GbuR 0.18 Pf6N2E2_4430 Autolysis response regulater LytR low > 103
Azospirillum sp. SherDot2 0.23 MPMX19_03701 hypothetical protein 0.55 MPMX19_06239 Transcriptional regulatory protein BtsR low > 112
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4434 Transcriptional regulator GbuR 0.19 PfGW456L13_855 Autolysis response regulater LytR low > 87
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18405 LysR family transcriptional regulator 0.19 AO353_08995 chemotaxis protein CheY low > 101
Azospirillum brasilense Sp245 0.22 AZOBR_RS30800 transcriptional regulator 0.56 AZOBR_RS22560 transcriptional regulator — —
Pseudomonas sp. S08-1 0.22 OH686_11350 Transcriptional regulator GbuR 0.18 OH686_13895 Alginate biosynthesis two-component system response regulator AlgR low > 80
Klebsiella michiganensis M5al 0.21 BWI76_RS21930 LysR family transcriptional regulator 0.61 BWI76_RS19470 DNA-binding response regulator low > 92
Shewanella amazonensis SB2B 0.20 Sama_1630 LysR family transcriptional regulator (RefSeq) 0.51 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) low > 62
Rahnella sp. WP5 0.19 EX31_RS06810 LysR family transcriptional regulator 0.54 EX31_RS00780 two-component system response regulator BtsR low > 89
Serratia liquefaciens MT49 0.19 IAI46_08230 LysR family transcriptional regulator 0.56 IAI46_23615 two-component system response regulator BtsR low > 86
Variovorax sp. SCN45 0.18 GFF6151 Transcriptional regulator, LysR family 0.21 GFF6666 Transcriptional regulator protein low > 127
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS16045 LysR family transcriptional regulator 0.19 ABZR87_RS11570 LytTR family DNA-binding domain-containing protein low > 80
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS08550 LysR family transcriptional regulator 0.19 HSERO_RS18060 LytR family transcriptional regulator low > 78
Alteromonas macleodii MIT1002 0.15 MIT1002_01262 DNA-binding transcriptional activator XapR 0.51 MIT1002_01189 Transcriptional regulatory protein YehT low > 70
Shewanella loihica PV-4 0.14 Shew_3174 LysR family transcriptional regulator (RefSeq) 0.53 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) low > 60

Not shown: 13 genomes with orthologs for HER17_RS12330 only; 40 genomes with orthologs for HER17_RS05370 only