Conservation of cofitness between HER17_RS09575 and HER17_RS04875 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09575 transcriptional regulator TyrR 1.0 HER17_RS04875 type VI secretion system baseplate subunit TssK 0.57 17
Dickeya dadantii 3937 0.78 DDA3937_RS12390 transcriptional regulator TyrR 0.93 DDA3937_RS07050 type VI secretion system baseplate subunit TssK low > 74
Serratia liquefaciens MT49 0.78 IAI46_13470 transcriptional regulator TyrR 0.13 IAI46_05585 type VI secretion system baseplate subunit TssK low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS12460 transcriptional regulator TyrR 0.93 HGI48_RS07980 type VI secretion system baseplate subunit TssK low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS12910 transcriptional regulator TyrR 0.92 DZA65_RS08575 type VI secretion system baseplate subunit TssK low > 75
Rahnella sp. WP5 0.74 EX31_RS06335 transcriptional regulator TyrR 0.15 EX31_RS01860 type VI secretion system baseplate subunit TssK low > 89
Pantoea sp. MT58 0.71 IAI47_09440 transcriptional regulator TyrR 0.31 IAI47_11690 type VI secretion system baseplate subunit TssK low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS11530 tyrR transcriptional regulator TyrR 0.54 LU632_RS17695 tssK type VI secretion system baseplate subunit TssK low > 74
Enterobacter sp. TBS_079 0.66 MPMX20_02454 Transcriptional regulatory protein TyrR 0.32 MPMX20_02680 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2679 Transcriptional repressor protein TyrR 0.30 GFF4064 Uncharacterized protein ImpJ/VasE low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism 0.32 EX28DRAFT_0788 type VI secretion protein, VC_A0114 family low > 76
Escherichia fergusonii Becca 0.65 EFB2_02604 Transcriptional regulatory protein TyrR 0.44 EFB2_03818 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.65 ECOLIN_RS07945 transcriptional regulator TyrR 0.14 ECOLIN_RS15705 type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC100 0.65 OKFHMN_02305 tyrR transcriptional regulator TyrR 0.45 OKFHMN_09890 tssK type VI secretion system baseplate subunit TssK low > 80
Escherichia coli ECRC101 0.65 MCAODC_15965 tyrR transcriptional regulator TyrR 0.45 MCAODC_00410 tssK type VI secretion system baseplate subunit TssK low > 87
Escherichia coli ECRC99 0.65 KEDOAH_26470 tyrR transcriptional regulator TyrR 0.45 KEDOAH_18260 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC98 0.65 JDDGAC_04850 tyrR transcriptional regulator TyrR 0.45 JDDGAC_13490 tssK type VI secretion system baseplate subunit TssK low > 86
Escherichia coli ECRC102 0.65 NIAGMN_26475 tyrR transcriptional regulator TyrR 0.45 NIAGMN_07740 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECOR27 0.65 NOLOHH_20000 tyrR transcriptional regulator TyrR 0.45 NOLOHH_02250 tssK type VI secretion system baseplate subunit TssK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02359 Transcriptional regulatory protein TyrR 0.45 OHPLBJKB_03434 hypothetical protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_06605 transcriptional regulator TyrR 0.62 CSW01_14585 type VI secretion system baseplate subunit TssK low > 62
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2629 Phenylalanine hydroxylase transcriptional activator PhhR 0.42 Pf6N2E2_4339 Uncharacterized protein ImpJ/VasE low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_03970 AAA family ATPase 0.43 AO356_12305 type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3567 Phenylalanine hydroxylase transcriptional activator PhhR 0.43 Pf1N1B4_2068 Uncharacterized protein ImpJ/VasE low > 87
Pseudomonas sp. S08-1 0.40 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR 0.34 OH686_12790 T6SS component TssK (ImpJ/VasE) low > 80
Pseudomonas sp. RS175 0.40 PFR28_00803 Transcriptional regulatory protein TyrR 0.43 PFR28_04452 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18590 AAA family ATPase 0.42 AO353_09555 type VI secretion protein 0.27 61
Pseudomonas simiae WCS417 0.40 PS417_19895 ATPase AAA 0.43 PS417_27930 type VI secretion protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR 0.43 PFLU_RS29610 type VI secretion system baseplate subunit TssK low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR 0.43 PFLU_RS29610 type VI secretion system baseplate subunit TssK low > 109
Pseudomonas putida KT2440 0.39 PP_4489 sigma-54 dependent transcriptional regulator 0.48 PP_2617 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.38 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism 0.36 Psest_4244 type VI secretion protein, VC_A0114 family low > 67
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3574 Helix-turn-helix, Fis-type 0.18 Psyr_4960 protein of unknown function DUF876 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3574 Helix-turn-helix, Fis-type 0.18 Psyr_4960 protein of unknown function DUF876 low > 86

Not shown: 14 genomes with orthologs for HER17_RS09575 only; 17 genomes with orthologs for HER17_RS04875 only