Conservation of cofitness between HER17_RS02000 and HER17_RS02990 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02000 two-component system response regulator PmrA 1.0 HER17_RS02990 RNA polymerase-associated protein RapA 0.59 19
Dickeya dianthicola 67-19 0.88 HGI48_RS19450 two-component system response regulator PmrA 0.87 HGI48_RS18170 RNA polymerase-associated protein RapA low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS20570 two-component system response regulator PmrA 0.86 DZA65_RS19310 RNA polymerase-associated protein RapA low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS19350 two-component system response regulator PmrA 0.87 DDA3937_RS18235 RNA polymerase-associated protein RapA low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3235 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.79 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family low > 76
Rahnella sp. WP5 0.67 EX31_RS08605 two-component system response regulator PmrA 0.80 EX31_RS03745 RNA polymerase-associated protein RapA low > 89
Enterobacter sp. TBS_079 0.64 MPMX20_04087 Transcriptional regulatory protein BasR 0.79 MPMX20_00753 RNA polymerase-associated protein RapA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF1469 Transcriptional regulatory protein basR/pmrA 0.79 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Escherichia fergusonii Becca 0.64 EFB2_04469 Transcriptional regulatory protein BasR 0.79 EFB2_03986 RNA polymerase-associated protein RapA low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS23805 two-component system response regulator BasR 0.79 ECOLIN_RS00315 RNA polymerase-associated protein RapA 0.71 2
Escherichia coli ECRC100 0.64 OKFHMN_12570 basR two-component system response regulator BasR 0.79 OKFHMN_10800 rapA RNA polymerase-associated protein RapA low > 80
Escherichia coli BW25113 0.64 b4113 basR DNA-binding response regulator in two-component regulatory system with BasS (NCBI) 0.79 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia coli ECOR38 0.64 HEPCGN_11205 basR two-component system response regulator BasR 0.79 HEPCGN_08790 rapA RNA polymerase-associated protein RapA 0.89 15
Escherichia coli BL21 0.63 ECD_03984 response regulator in two-component regulatory system with BasS 0.79 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase 0.54 21
Escherichia coli ECRC101 0.63 MCAODC_03080 basR two-component system response regulator BasR 0.79 MCAODC_01315 rapA RNA polymerase-associated protein RapA low > 87
Escherichia coli ECRC62 0.63 BNILDI_06655 basR two-component system response regulator BasR 0.79 BNILDI_08460 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC102 0.63 NIAGMN_10415 basR two-component system response regulator BasR 0.79 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03931 Transcriptional regulatory protein BasR 0.79 OHPLBJKB_03599 RNA polymerase-associated protein RapA low > 73
Escherichia coli ECRC98 0.63 JDDGAC_16205 basR two-component system response regulator BasR 0.79 JDDGAC_14395 rapA RNA polymerase-associated protein RapA low > 86
Escherichia coli ECOR27 0.63 NOLOHH_04835 basR two-component system response regulator BasR 0.79 NOLOHH_03145 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC99 0.63 KEDOAH_15595 basR two-component system response regulator BasR 0.79 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Klebsiella michiganensis M5al 0.62 BWI76_RS08795 DNA-binding response regulator 0.79 BWI76_RS04570 RNA polymerase-associated protein RapA low > 92
Erwinia tracheiphila SCR3 0.60 LU632_RS21175 pmrA two-component system response regulator PmrA 0.77 LU632_RS02805 rapA RNA polymerase-associated protein RapA low > 74
Pantoea sp. MT58 0.57 IAI47_08260 two-component system response regulator PmrA 0.79 IAI47_16055 RNA polymerase-associated protein RapA low > 76
Serratia liquefaciens MT49 0.57 IAI46_01870 two-component system response regulator PmrA 0.85 IAI46_03275 RNA polymerase-associated protein RapA low > 86
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS12650 response regulator 0.32 ABZR86_RS09245 RNA polymerase-associated protein RapA low > 74
Alteromonas macleodii MIT1002 0.41 MIT1002_00810 Transcriptional regulatory protein BasR 0.43 MIT1002_00659 RNA polymerase-associated protein RapA low > 70
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_19595 DNA-binding response regulator 0.64 CSW01_12705 RNA polymerase-associated protein RapA low > 62
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_14050 ompR DNA-binding response regulator 0.32 OKGIIK_09865 rapA RNA polymerase-associated protein RapA low > 52
Marinobacter adhaerens HP15 0.39 HP15_2937 two component transcriptional regulator, winged helix family 0.41 HP15_3376 RNA polymerase-associated protein RapA low > 73
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07600 response regulator 0.32 LRK54_RS02885 RNA polymerase-associated protein RapA low > 59
Rhodanobacter denitrificans MT42 0.39 LRK55_RS07340 response regulator 0.32 LRK55_RS02635 RNA polymerase-associated protein RapA low > 63
Shewanella loihica PV-4 0.38 Shew_0583 two component transcriptional regulator (RefSeq) 0.58 Shew_0457 ATP-dependent helicase HepA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.36 Sama_3006 response regulator receiver protein (RefSeq) 0.57 Sama_3131 ATP-dependent helicase HepA (RefSeq) low > 62

Not shown: 16 genomes with orthologs for HER17_RS02000 only; 17 genomes with orthologs for HER17_RS02990 only