Conservation of cofitness between HER17_RS00890 and HER17_RS02615 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00890 iron ABC transporter permease 1.0 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.50 19
Dickeya dadantii 3937 0.64 DDA3937_RS02510 iron ABC transporter permease 0.89 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS02455 iron ABC transporter permease 0.88 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.35 62
Serratia liquefaciens MT49 0.60 IAI46_02280 iron ABC transporter permease 0.87 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 86
Klebsiella michiganensis M5al 0.58 BWI76_RS14920 ABC transporter permease 0.85 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 92
Dickeya dianthicola ME23 0.56 DZA65_RS02560 iron ABC transporter permease 0.87 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 75
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_80 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.57 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3546 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.57 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_13550 ABC transporter permease 0.57 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase — —
Pseudomonas sp. RS175 0.39 PFR28_05188 Hemin transport system permease protein HmuU 0.57 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase — —
Pseudomonas fluorescens SBW25 0.39 PFLU_RS02915 iron ABC transporter permease 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS02915 iron ABC transporter permease 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 109
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1341 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.56 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) — —
Pseudomonas simiae WCS417 0.38 PS417_02845 ABC transporter permease 0.58 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_5104 transport system permease protein 0.57 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_5104 transport system permease protein 0.57 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 86
Shewanella oneidensis MR-1 0.32 SO1034 iron-compound ABC transporter, permease protein (NCBI ptt file) 0.61 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.32 Sama_0761 iron-compound ABC transporter, permease protein (RefSeq) 0.59 Sama_0769 UDP-N-acetylmuramate (RefSeq) low > 62
Shewanella loihica PV-4 0.31 Shew_0713 transport system permease protein (RefSeq) 0.60 Shew_3144 UDP-N-acetylmuramate (RefSeq) low > 60
Shewanella sp. ANA-3 0.30 Shewana3_3279 Vitamin B12 transporter, permease component (fecCD-like) (from data) 0.61 Shewana3_0791 UDP-N-acetylmuramate (RefSeq) low > 73
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2824 ABC-type Fe3+-siderophore transport system, permease component 0.84 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase low > 76
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_16425 ABC transporter permease 0.57 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 104
Pseudomonas putida KT2440 0.24 PP_2417 putative Iron ABC transporter, permease protein 0.58 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase low > 96
Acidovorax sp. GW101-3H11 0.20 Ac3H11_989 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 0.44 Ac3H11_4032 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) low > 79

Not shown: 6 genomes with orthologs for HER17_RS00890 only; 51 genomes with orthologs for HER17_RS02615 only