Conservation of cofitness between HER17_RS15910 and HER17_RS01130 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15910 2-dehydropantoate 2-reductase 1.0 HER17_RS01130 ATP-dependent RNA helicase RhlB 0.88 13
Dickeya dianthicola ME23 0.79 DZA65_RS05940 2-dehydropantoate 2-reductase 0.91 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.91 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS05615 2-dehydropantoate 2-reductase 0.91 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Serratia liquefaciens MT49 0.69 IAI46_04950 2-dehydropantoate 2-reductase 0.91 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_01016 2-dehydropantoate 2-reductase 0.89 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.89 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Klebsiella michiganensis M5al 0.63 BWI76_RS06405 2-dehydropantoate 2-reductase 0.87 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Rahnella sp. WP5 0.63 EX31_RS22180 2-dehydropantoate 2-reductase 0.85 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Escherichia coli ECOR38 0.63 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.89 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli BW25113 0.63 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.89 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.89 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia fergusonii Becca 0.63 EFB2_03632 2-dehydropantoate 2-reductase 0.89 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli BL21 0.63 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.89 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli ECOR27 0.62 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.89 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.89 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 73
Escherichia coli ECRC62 0.62 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.89 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC100 0.61 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.88 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC102 0.61 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.88 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC101 0.61 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.88 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC99 0.61 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.88 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC98 0.61 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.88 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 86
Pantoea sp. MT58 0.61 IAI47_14715 2-dehydropantoate 2-reductase 0.86 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.85 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4336 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.89 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_11730 2-dehydropantoate 2-reductase 0.73 CSW01_01555 ATP-dependent RNA helicase RhlB 0.76 57
Shewanella sp. ANA-3 0.25 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.67 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.67 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.22 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.66 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) — —
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.37 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.20 MIT1002_01217 2-dehydropantoate 2-reductase 0.61 MIT1002_00515 ATP-dependent RNA helicase RhlB low > 70
Pseudomonas putida KT2440 0.20 PP_1351 putative 2-dehydropantoate 2-reductase 0.38 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Marinobacter adhaerens HP15 0.19 HP15_1312 2-dehydropantoate 2-reductase 0.40 HP15_2099 DEAD/DEAH box helicase domain protein low > 73

Not shown: 27 genomes with orthologs for HER17_RS15910 only; 2 genomes with orthologs for HER17_RS01130 only