Conservation of cofitness between HER17_RS02815 and HER17_RS01130 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02815 transaldolase 1.0 HER17_RS01130 ATP-dependent RNA helicase RhlB 0.88 12
Dickeya dianthicola ME23 0.93 DZA65_RS19465 transaldolase 0.91 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC102 0.92 NIAGMN_08930 transaldolase B 0.88 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli BW25113 0.92 b0008 talB transaldolase B (NCBI) 0.89 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS00045 transaldolase 0.89 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia coli ECRC62 0.92 BNILDI_08195 transaldolase B 0.89 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC98 0.92 JDDGAC_14675 transaldolase B 0.88 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECRC99 0.92 KEDOAH_17075 transaldolase B 0.88 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia fergusonii Becca 0.92 EFB2_04035 Transaldolase B 0.89 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECRC101 0.92 MCAODC_01595 transaldolase B 0.88 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Serratia liquefaciens MT49 0.92 IAI46_03055 transaldolase 0.91 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECOR38 0.92 HEPCGN_09085 transaldolase B 0.89 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC100 0.92 OKFHMN_11080 transaldolase B 0.88 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 80
Dickeya dianthicola 67-19 0.92 HGI48_RS18325 transaldolase 0.91 HGI48_RS20225 ATP-dependent RNA helicase RhlB 0.91 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_03652 Transaldolase 0.89 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 73
Escherichia coli ECOR27 0.92 NOLOHH_03410 transaldolase B 0.89 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli BL21 0.92 ECD_00008 transaldolase B 0.89 ECD_03658 ATP-dependent RNA helicase low > 61
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.91 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1083 Transaldolase (EC 2.2.1.2) 0.89 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Rahnella sp. WP5 0.91 EX31_RS03920 transaldolase 0.85 EX31_RS15040 ATP-dependent RNA helicase RhlB 0.56 70
Klebsiella michiganensis M5al 0.91 BWI76_RS04270 transaldolase 0.87 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_00716 Transaldolase B 0.89 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3620 transaldolase 0.89 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.86 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Erwinia tracheiphila SCR3 0.87 LU632_RS02630 tal transaldolase 0.85 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_17325 transaldolase 0.73 CSW01_01555 ATP-dependent RNA helicase RhlB 0.87 18
Shewanella sp. ANA-3 0.69 Shewana3_3147 transaldolase B (RefSeq) 0.67 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella amazonensis SB2B 0.69 Sama_0913 transaldolase B (RefSeq) 0.66 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella loihica PV-4 0.69 Shew_1089 transaldolase B (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO3546 tal transaldolase (NCBI ptt file) 0.67 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.67 MIT1002_03080 Transaldolase B 0.61 MIT1002_00515 ATP-dependent RNA helicase RhlB — —
Pseudomonas putida KT2440 0.57 PP_2168 Transaldolase 0.38 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Marinobacter adhaerens HP15 0.54 HP15_2241 transaldolase 0.40 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.37 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Acinetobacter radioresistens SK82 0.46 MPMX26_01753 Transaldolase 0.38 MPMX26_01113 ATP-dependent RNA helicase RhlB low > 36

Not shown: 29 genomes with orthologs for HER17_RS02815 only; 1 genomes with orthologs for HER17_RS01130 only