Conservation of cofitness between HEPCGN_04800 and HEPCGN_22895 in Escherichia coli ECOR38

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04800 yobA CopC domain-containing protein YobA 1.0 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS 0.54 19
Escherichia coli BW25113 0.99 b1841 yobA hypothetical protein (NCBI) 1.00 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_01812 CopC family protein 1.00 ECD_00886 regulatory protein for ClpA substrate specificity 0.35 17
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10250 CopC domain-containing protein YobA 1.00 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS — —
Escherichia fergusonii Becca 0.99 EFB2_02103 Protein YobA 1.00 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Escherichia coli ECRC101 0.98 MCAODC_19005 yobA CopC domain-containing protein YobA 1.00 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC99 0.98 KEDOAH_01705 yobA CopC domain-containing protein YobA 1.00 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01890 Protein YobA 1.00 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS low > 73
Escherichia coli ECRC102 0.98 NIAGMN_01660 yobA CopC domain-containing protein YobA 1.00 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC100 0.98 OKFHMN_26400 yobA CopC domain-containing protein YobA 1.00 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS low > 80
Escherichia coli ECRC98 0.98 JDDGAC_00975 yobA CopC domain-containing protein YobA 1.00 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS low > 86
Escherichia coli ECOR27 0.98 NOLOHH_16910 yobA CopC domain-containing protein YobA 1.00 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli ECRC62 0.98 BNILDI_15705 yobA CopC domain-containing protein YobA 1.00 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1620 Copper resistance protein CopC 0.98 GFF4902 ATP-dependent Clp protease adaptor protein ClpS low > 78
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0713 Uncharacterized protein, homolog of Cu resistance protein CopC 0.95 EX28DRAFT_2051 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02748 Protein YobA 0.95 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS18060 hypothetical protein 0.91 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS low > 92
Serratia liquefaciens MT49 0.45 IAI46_10005 CopC domain-containing protein YobA 0.87 IAI46_08510 ATP-dependent Clp protease adapter ClpS — —
Erwinia tracheiphila SCR3 0.45 LU632_RS13300 yobA CopC domain-containing protein YobA 0.89 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS low > 74
Rahnella sp. WP5 0.39 EX31_RS24770 copper homeostasis periplasmic binding protein CopC 0.84 EX31_RS18565 ATP-dependent Clp protease adapter ClpS low > 89
Dickeya dadantii 3937 0.33 DDA3937_RS10160 copper homeostasis periplasmic binding protein CopC 0.78 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS10605 copper homeostasis periplasmic binding protein CopC 0.79 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS — —
Dickeya dianthicola 67-19 0.31 HGI48_RS10190 copper homeostasis periplasmic binding protein CopC 0.79 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS low > 71
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16425 copper resistance protein 0.52 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS02285 copper homeostasis periplasmic binding protein CopC 0.50 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS low > 153
Paraburkholderia graminis OAS925 0.27 ABIE53_005709 methionine-rich copper-binding protein CopC 0.51 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS low > 113
Castellaniella sp019104865 MT123 0.27 ABCV34_RS03900 copper homeostasis periplasmic binding protein CopC 0.44 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS low > 48
Ralstonia solanacearum PSI07 0.25 RPSI07_RS02370 copper resistance protein C 0.55 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS low > 81
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS35360 copper resistance protein CopC 0.55 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS low > 128
Magnetospirillum magneticum AMB-1 0.22 AMB_RS01165 hypothetical protein 0.53 AMB_RS05700 ATP-dependent Clp protease adapter ClpS low > 64
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS20875 copper resistance protein C 0.55 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS22010 copper resistance protein C 0.55 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS03230 copper homeostasis periplasmic binding protein CopC 0.50 A4249_RS08395 ATP-dependent Clp protease adapter ClpS low > 48
Ralstonia solanacearum GMI1000 0.21 RS_RS20270 copper resistance protein C 0.55 RS_RS12375 ATP-dependent Clp protease adaptor ClpS low > 80
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS21865 copper homeostasis periplasmic binding protein CopC 0.55 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS — —
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_0449 Uncharacterized protein, homolog of Cu resistance protein CopC 0.56 Ga0059261_1285 Uncharacterized conserved protein low > 68

Not shown: 12 genomes with orthologs for HEPCGN_04800 only; 29 genomes with orthologs for HEPCGN_22895 only