Conservation of cofitness between HEPCGN_04840 and HEPCGN_01310 in Escherichia coli ECOR38

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 HEPCGN_01310 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase 0.53 17
Escherichia coli ECOR27 0.99 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_23310 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia coli ECRC62 0.99 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 BNILDI_21305 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_02990 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex low > 73
Escherichia coli BL21 0.98 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1.00 ECD_00686 dihydrolipoyltranssuccinase — —
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 1.00 b0727 sucB dihydrolipoamide acetyltransferase (NCBI) — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 ECOLIN_RS03875 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 1.00 EFB2_03379 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex — —
Escherichia coli ECRC101 0.98 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 MCAODC_26140 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase low > 87
Escherichia coli ECRC102 0.98 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NIAGMN_04970 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia coli ECRC100 0.98 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 OKFHMN_06920 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia coli ECRC99 0.98 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 KEDOAH_21045 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Escherichia coli ECRC98 0.98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 JDDGAC_10575 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.95 GFF4640 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) — —
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.91 EX28DRAFT_2265 2-oxoglutarate dehydrogenase E2 component (EC 2.3.1.61) low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.91 MPMX20_01355 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.90 BWI76_RS08420 dihydrolipoamide succinyltransferase — —
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 IAI47_13740 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase low > 76
Serratia liquefaciens MT49 0.69 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 IAI46_06280 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 EX31_RS23445 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 HER17_RS14925 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 DDA3937_RS06465 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 DZA65_RS06850 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 HGI48_RS06505 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.76 CSW01_10425 dihydrolipoyllysine-residue succinyltransferase — —
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.68 Shewana3_1711 2-oxoglutarate dehydrogenase E2 component (RefSeq) — —
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.69 Shew_1656 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.70 SO1931 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.71 Sama_1428 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) (RefSeq) — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase 0.59 B158DRAFT_1425 2-oxoglutarate dehydrogenase E2 component (EC 2.3.1.61) — —
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) 0.26 BT0311 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00671 NOL1/NOP2/sun family protein 0.27 BACOVA_01652 2-oxo acid dehydrogenase acyltransferase (catalytic domain) low > 94
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase 0.27 HMPREF1078_RS01940 2-oxo acid dehydrogenase subunit E2 low > 61

Not shown: 4 genomes with orthologs for HEPCGN_04840 only; 55 genomes with orthologs for HEPCGN_01310 only