| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2029 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 1.0 | GFF5231 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.63 | 17 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS05420 | | 4-aminobutyrate aminotransferase | 0.27 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | low | > 78 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_04919 | | 5-aminovalerate aminotransferase DavT | 0.51 | MPMX19_03529 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | low | > 112 |
| Variovorax sp. SCN45 | 0.57 | GFF921 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.57 | GFF1521 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 127 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_18255 | puuE | 4-aminobutyrate transaminase | 0.31 | BNILDI_03725 | yiaO | 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO | low | > 75 |
| Escherichia coli BL21 | 0.57 | ECD_01279 | | 4-aminobutyrate aminotransferase, PLP-dependent | 0.31 | ECD_03431 | | 2,3-diketo-L-gulonate-binding periplasmic protein | low | > 61 |
| Escherichia coli BW25113 | 0.57 | b1302 | puuE | GABA aminotransferase, PLP-dependent (NCBI) | 0.31 | b3579 | yiaO | predicted transporter (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_20105 | puuE | 4-aminobutyrate transaminase | 0.31 | NOLOHH_07820 | yiaO | 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.56 | OHPLBJKB_02380 | | 4-aminobutyrate aminotransferase PuuE | 0.31 | OHPLBJKB_00125 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | low | > 73 |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_25780 | puuE | 4-aminobutyrate transaminase | 0.31 | HEPCGN_14765 | yiaO | 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO | low | > 87 |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS01765 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.61 | ABCV34_RS11540 | | TRAP transporter substrate-binding protein | low | > 48 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS21585 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.47 | ABID97_RS26055 | | TRAP transporter substrate-binding protein | — | — |
| Sinorhizobium meliloti 1021 | 0.52 | SM_b21186 | | 4-aminobutyrate aminotransferase | 0.55 | SM_b20036 | | ABC transporter substrate-binding protein | low | > 103 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_4179 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.60 | Ac3H11_1227 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 79 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_4013 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | 0.53 | Pf6N2E2_1301 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 103 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_04756 | | 5-aminovalerate aminotransferase DavT | 0.53 | PFR28_01614 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_10715 | | 4-aminobutyrate aminotransferase | 0.52 | AO356_25645 | | ABC transporter substrate-binding protein | low | > 104 |
| Shewanella loihica PV-4 | 0.49 | Shew_3172 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.21 | Shew_1446 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) | low | > 60 |
| Escherichia fergusonii Becca | 0.48 | EFB2_01268 | | 4-aminobutyrate aminotransferase GabT | 0.31 | EFB2_00227 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | low | > 86 |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS14845 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.31 | ECOLIN_RS20470 | | 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF1567 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.31 | GFF430 | | 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor | low | > 78 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_3091 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.22 | Shewana3_1416 | | TRAP dicarboxylate transporter, DctP subunit (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.45 | SO1276 | gabT | 4-aminobutyrate aminotransferase (NCBI ptt file) | 0.22 | SO3134 | dctP | C4-dicarboxylate-binding periplasmic protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.45 | Sama_2636 | | gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) | 0.21 | Sama_2209 | | alpha-ketoglutarate TRAP transporter, solute receptor component (from data) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.44 | HP15_3708 | | 4-aminobutyrate aminotransferase | 0.16 | HP15_4076 | | TRAP dicarboxylate transporter, DctP subunit | low | > 73 |
Not shown: 44 genomes with orthologs for GFF2029 only; 2 genomes with orthologs for GFF5231 only