Conservation of cofitness between PS417_27980 and PS417_26380 in Pseudomonas simiae WCS417

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27980 ATPase AAA 1.0 PS417_26380 YccS/YhfK family integral membrane protein 0.19 1
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS29660 type VI secretion system ATPase TssH 0.99 PFLU_RS28030 TIGR01666 family membrane protein low > 109
Pseudomonas fluorescens SBW25 0.96 PFLU_RS29660 type VI secretion system ATPase TssH 0.99 PFLU_RS28030 TIGR01666 family membrane protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_12245 ClpV1 family T6SS ATPase 0.90 AO356_13760 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4327 ClpB protein 0.87 Pf6N2E2_4671 FIG00956403: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_09620 ClpV1 family T6SS ATPase 0.92 AO353_07860 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2056 ClpB protein 0.92 Pf1N1B4_2410 FIG00956403: hypothetical protein low > 87
Pseudomonas sp. RS175 0.93 PFR28_04464 Protein ClpV1 0.90 PFR28_04174 Inner membrane protein YccS low > 88
Variovorax sp. OAS795 0.69 ABID97_RS05065 type VI secretion system ATPase TssH 0.05 ABID97_RS20740 FUSC family membrane protein low > 91
Variovorax sp. SCN45 0.68 GFF5936 T6SS AAA+ chaperone ClpV (TssH) 0.47 GFF2446 FIG00956403: hypothetical protein low > 127
Enterobacter sp. TBS_079 0.60 MPMX20_02660 Protein ClpV1 0.34 MPMX20_01610 Inner membrane protein YccS low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0807 type VI secretion ATPase, ClpV1 family 0.34 EX28DRAFT_1983 TIGR01666 family membrane protein low > 76
Pantoea sp. MT58 0.56 IAI47_11580 type VI secretion system ATPase TssH 0.31 IAI47_12630 TIGR01666 family membrane protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF4054 ClpB protein 0.33 GFF3251 Putative efflux (PET) family inner membrane protein YccS low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.88 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.88 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK low > 86
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS03730 ATPase 0.11 HSERO_RS10560 membrane protein low > 78
Pseudomonas putida KT2440 0.46 PP_3095 Protein ClpV1 0.85 PP_4954 conserved membrane protein of unknown function low > 96
Acinetobacter radioresistens SK82 0.43 MPMX26_00960 Protein ClpV1 0.30 MPMX26_00618 Inner membrane protein YccS low > 36
Rahnella sp. WP5 0.41 EX31_RS01880 type VI secretion system ATPase TssH 0.34 EX31_RS18025 TIGR01666 family membrane protein low > 89
Escherichia coli Nissle 1917 0.38 ECOLIN_RS15725 type VI secretion system ATPase TssH 0.34 ECOLIN_RS05045 YccS family putative transporter
Escherichia fergusonii Becca 0.38 EFB2_01093 Protein ClpV1 0.34 EFB2_03111 Inner membrane protein YccS low > 86
Dickeya dadantii 3937 0.37 DDA3937_RS07060 type VI secretion system ATPase TssH 0.32 DDA3937_RS15230 TIGR01666 family membrane protein low > 74
Dickeya dianthicola 67-19 0.37 HGI48_RS07990 type VI secretion system ATPase TssH 0.32 HGI48_RS15305 TIGR01666 family membrane protein low > 71
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_14595 type VI secretion system ATPase TssH 0.42 CSW01_17765 TIGR01666 family membrane protein low > 62
Dickeya dianthicola ME23 0.37 DZA65_RS08585 type VI secretion system ATPase TssH 0.32 DZA65_RS16130 TIGR01666 family membrane protein low > 75
Serratia liquefaciens MT49 0.36 IAI46_05600 type VI secretion system ATPase TssH 0.34 IAI46_08890 TIGR01666 family membrane protein low > 86
Escherichia coli ECRC99 0.35 KEDOAH_18250 tssH type VI secretion system ATPase TssH 0.34 KEDOAH_22515 yccS Inner membrane protein YccS
Escherichia coli ECRC102 0.35 NIAGMN_07750 tssH type VI secretion system ATPase TssH 0.34 NIAGMN_02940 yccS Inner membrane protein YccS
Escherichia coli ECRC101 0.35 MCAODC_00420 tssH type VI secretion system ATPase TssH 0.34 MCAODC_24610 yccS Inner membrane protein YccS
Escherichia coli ECOR27 0.35 NOLOHH_02260 tssH type VI secretion system ATPase TssH 0.34 NOLOHH_21775 yccS Inner membrane protein YccS low > 57
Escherichia coli ECRC101 0.35 OKFHMN_09900 tssH type VI secretion system ATPase TssH 0.34 OKFHMN_05220 yccS Inner membrane protein YccS
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03436 Protein ClpV1 0.34 OHPLBJKB_02706 Inner membrane protein YccS low > 73
Escherichia coli ECRC98 0.35 JDDGAC_13500 tssH type VI secretion system ATPase TssH 0.34 JDDGAC_08830 yccS Inner membrane protein YccS
Pectobacterium carotovorum WPP14 0.35 HER17_RS04885 type VI secretion system ATPase TssH 0.33 HER17_RS08435 YccS family putative transporter low > 75

Not shown: 16 genomes with orthologs for PS417_27980 only; 14 genomes with orthologs for PS417_26380 only