Conservation of cofitness between PS417_21010 and PS417_26040 in Pseudomonas simiae WCS417

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_21010 ribonuclease activity regulator protein RraA 1.0 PS417_26040 malate synthase 0.35 13
Pseudomonas fluorescens SBW25 1.00 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.98 PFLU_RS27685 malate synthase G 0.82 5
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.98 PFLU_RS27685 malate synthase G 0.45 3
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_00850 ribonuclease activity regulator protein RraA 0.93 AO353_07560 malate synthase G 0.29 46
Pseudomonas sp. RS175 0.94 PFR28_01040 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.93 PFR28_04110 Malate synthase G 0.42 3
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_02815 ribonuclease activity regulator protein RraA 0.94 AO356_14100 malate synthase G 0.38 17
Pseudomonas putida KT2440 0.93 PP_2084 Putative regulator of ribonuclease activity 0.85 PP_0356 malate synthase G 0.23 4
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2387 Ribonuclease E inhibitor RraA 0.93 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) low > 103
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4110 Ribonuclease E inhibitor RraA 0.93 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) 0.44 36
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3828 Ribonuclease E inhibitor RraA 0.93 Pf1N1B4_2478 Malate synthase G (EC 2.3.3.9) low > 87
Pseudomonas sp. S08-1 0.91 OH686_01650 Ribonuclease E inhibitor RraA 0.87 OH686_10405 malate synthase G low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_2315 RraA famliy 0.85 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_2092 Protein of unknown function 1935 0.89 Psyr_4700 malate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_2092 Protein of unknown function 1935 0.89 Psyr_4700 malate synthase low > 86
Marinobacter adhaerens HP15 0.70 HP15_2228 ribonuclease activity regulator protein RraA 0.70 HP15_2188 malate synthase G low > 73
Acinetobacter radioresistens SK82 0.55 MPMX26_01316 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.61 MPMX26_01247 Malate synthase G low > 36
Escherichia coli ECRC62 0.54 BNILDI_05635 rraA ribonuclease E activity regulator RraA 0.58 BNILDI_00575 glcB malate synthase G — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS22625 ribonuclease E activity regulator RraA 0.59 ECOLIN_RS17120 malate synthase G low > 52
Escherichia coli ECOR38 0.54 HEPCGN_12395 rraA ribonuclease E activity regulator RraA 0.59 HEPCGN_18015 glcB malate synthase G low > 85
Escherichia coli BW25113 0.54 b3929 rraA ribonuclease activity regulator protein RraA (NCBI) 0.59 b2976 glcB malate synthase (NCBI) low > 76
Escherichia coli BL21 0.54 ECD_03814 ribonuclease E (RNase E) inhibitor protein 0.59 ECD_02844 malate synthase G low > 60
Escherichia fergusonii Becca 0.54 EFB2_04689 Regulator of ribonuclease activity A 0.58 EFB2_00839 Malate synthase G low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_04122 Regulator of ribonuclease activity A 0.59 OHPLBJKB_00731 Malate synthase G low > 73
Escherichia coli ECOR27 0.54 NOLOHH_05895 rraA ribonuclease E activity regulator RraA 0.59 NOLOHH_10940 glcB malate synthase G low > 57
Alteromonas macleodii MIT1002 0.52 MIT1002_00164 Regulator of ribonuclease activity A 0.60 MIT1002_02833 Malate synthase G low > 70
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS06240 ribonuclease E activity regulator RraA 0.69 QEN71_RS31820 malate synthase G low > 153
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS12315 ribonuclease 0.67 BPHYT_RS31665 malate synthase — —
Azospirillum sp. SherDot2 0.46 MPMX19_04842 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.67 MPMX19_04824 Malate synthase G low > 112
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2834 Ribonuclease E inhibitor RraA 0.66 Ac3H11_4835 Malate synthase G (EC 2.3.3.9) — —
Mycobacterium tuberculosis H37Rv 0.43 Rv3853 Regulator of RNase E activity a RraA 0.67 Rv1837c Malate synthase G GlcB — —
Variovorax sp. SCN45 0.39 GFF4367 KEGG: regulator of ribonuclease activity A 0.64 GFF6305 Malate synthase G (EC 2.3.3.9) — —

Not shown: 33 genomes with orthologs for PS417_21010 only; 15 genomes with orthologs for PS417_26040 only