Conservation of cofitness between PS417_26335 and PS417_25635 in Pseudomonas simiae WCS417

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26335 BetI family transcriptional regulator 1.0 PS417_25635 biotin--protein ligase 0.15 20
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27985 transcriptional regulator BetI 0.92 PFLU_RS27265 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor low > 109
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27985 transcriptional regulator BetI 0.92 PFLU_RS27265 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_4734 transcriptional regulator, TetR family 0.68 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_4734 transcriptional regulator, TetR family 0.68 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_07800 transcriptional repressor BetI 0.77 AO353_07105 biotin--protein ligase low > 101
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1084 HTH-type transcriptional regulator BetI 0.78 PfGW456L13_1238 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2418 HTH-type transcriptional regulator BetI 0.79 Pf1N1B4_2565 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_13800 transcriptional repressor BetI 0.76 AO356_14540 biotin--protein ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4680 HTH-type transcriptional regulator BetI 0.76 Pf6N2E2_4841 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) low > 103
Pseudomonas putida KT2440 0.87 PP_5719 choline-responsive transcriptional repressor BetI 0.69 PP_0437 bifunctional biotin-[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Pseudomonas sp. RS175 0.83 PFR28_04166 HTH-type transcriptional regulator BetI 0.75 PFR28_04023 Bifunctional ligase/repressor BirA low > 88
Pectobacterium carotovorum WPP14 0.67 HER17_RS08385 transcriptional regulator BetI 0.33 HER17_RS20500 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Rahnella sp. WP5 0.64 EX31_RS18825 transcriptional regulator BetI 0.32 EX31_RS17135 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Serratia liquefaciens MT49 0.64 IAI46_07710 transcriptional regulator BetI 0.33 IAI46_01185 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Dickeya dadantii 3937 0.62 DDA3937_RS13270 transcriptional regulator BetI 0.33 DDA3937_RS01030 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Pantoea sp. MT58 0.55 IAI47_08655 transcriptional regulator BetI 0.34 IAI47_18175 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Klebsiella michiganensis M5al 0.55 BWI76_RS07620 transcriptional regulator BetI 0.32 BWI76_RS01425 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor — —
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2386 transcriptional regulator, TetR family 0.33 EX28DRAFT_4037 birA, biotin-[acetyl-CoA-carboxylase] ligase region/BirA biotin operon repressor domain — —
Enterobacter sp. TBS_079 0.54 MPMX20_01230 HTH-type transcriptional regulator BetI 0.33 MPMX20_04425 Bifunctional ligase/repressor BirA — —
Escherichia coli BW25113 0.52 b0313 betI probably transcriptional repressor of bet genes (VIMSS) 0.34 b3973 birA biotin--protein ligase (NCBI) low > 76
Escherichia fergusonii Becca 0.52 EFB2_03722 HTH-type transcriptional regulator BetI 0.34 EFB2_04637 Bifunctional ligase/repressor BirA — —
Escherichia coli ECOR27 0.52 NOLOHH_01890 betI transcriptional regulator BetI 0.34 NOLOHH_05635 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS02060 transcriptional regulator BetI 0.34 ECOLIN_RS22935 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03362 HTH-type transcriptional regulator BetI 0.34 OHPLBJKB_04077 Bifunctional ligase/repressor BirA — —
Escherichia coli ECRC101 0.52 OKFHMN_09040 betI transcriptional regulator BetI 0.34 OKFHMN_13490 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC62 0.52 BNILDI_00015 betI transcriptional regulator BetI 0.34 BNILDI_05890 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC99 0.52 KEDOAH_18925 betI transcriptional regulator BetI 0.34 KEDOAH_14670 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC98 0.52 JDDGAC_12690 betI transcriptional regulator BetI 0.34 JDDGAC_17115 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC102 0.52 NIAGMN_07095 betI transcriptional regulator BetI 0.34 NIAGMN_11240 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC101 0.52 MCAODC_28265 betI transcriptional regulator BetI 0.34 MCAODC_03990 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli BL21 0.52 ECD_00269 choline-inducible betIBA-betT divergent operon transcriptional repressor 0.34 ECD_03854 bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding — —
Escherichia coli ECOR38 0.51 HEPCGN_07600 betI transcriptional regulator BetI 0.34 HEPCGN_12140 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Marinobacter adhaerens HP15 0.45 HP15_3627 transcriptional regulator, TetR family 0.30 HP15_363 biotin-protein ligase low > 73
Alteromonas macleodii MIT1002 0.40 MIT1002_01124 Fatty acid metabolism regulator protein 0.29 MIT1002_03539 Bifunctional protein BirA low > 70

Not shown: 9 genomes with orthologs for PS417_26335 only; 25 genomes with orthologs for PS417_25635 only