| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF3024 | | Glutamine amidotransferase, class-II | 1.0 | GFF4944 | | transcriptional regulator, TetR family | 0.46 | 7 |
| Variovorax sp. OAS795 | 0.72 | ABID97_RS04635 | | class II glutamine amidotransferase | 0.70 | ABID97_RS25290 | | TetR family transcriptional regulator C-terminal domain-containing protein | low | > 91 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS26860 | | class II glutamine amidotransferase | 0.29 | QEN71_RS05380 | | TetR/AcrR family transcriptional regulator | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_04266 | | glutamine amidotransferase | 0.29 | H281DRAFT_00376 | | transcriptional regulator, TetR family | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS02595 | | glutamine amidotransferase | 0.27 | RR42_RS30810 | | TetR family transcriptional regulator | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.60 | RPSI07_RS21635 | | class II glutamine amidotransferase | 0.30 | RPSI07_RS18005 | | TetR/AcrR family transcriptional regulator | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS16680 | | glutamine amidotransferase | 0.30 | BPHYT_RS13325 | | TetR family transcriptional regulator | low | > 109 |
| Escherichia fergusonii Becca | 0.51 | EFB2_03794 | | Putative glutamine amidotransferase YafJ | 0.25 | EFB2_03067 | | HTH-type transcriptional regulator RutR | low | > 86 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS01755 | | class II glutamine amidotransferase | 0.25 | ECOLIN_RS05285 | | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_07875 | yafJ | Putative glutamine amidotransferase YafJ | 0.25 | HEPCGN_23530 | rutR | HTH-type transcriptional regulator RutR | low | > 85 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_00335 | yafJ | Putative glutamine amidotransferase YafJ | 0.25 | BNILDI_19675 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_07630 | yafJ | class II glutamine amidotransferase | 0.25 | NIAGMN_23725 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_09770 | yafJ | class II glutamine amidotransferase | 0.25 | OKFHMN_04610 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_18385 | yafJ | class II glutamine amidotransferase | 0.25 | KEDOAH_23135 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_13395 | yafJ | class II glutamine amidotransferase | 0.25 | JDDGAC_08220 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli BW25113 | 0.50 | b0223 | yafJ | predicted amidotransfease (NCBI) | 0.25 | b1013 | ycdC | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_02140 | yafJ | Putative glutamine amidotransferase YafJ | 0.25 | NOLOHH_21510 | rutR | HTH-type transcriptional regulator RutR | low | > 57 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_00290 | yafJ | class II glutamine amidotransferase | 0.25 | MCAODC_23995 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03416 | | Putative glutamine amidotransferase YafJ | 0.25 | OHPLBJKB_02653 | | HTH-type transcriptional regulator RutR | low | > 73 |
| Escherichia coli BL21 | 0.50 | ECD_00218 | | type 2 glutamine amidotransferase family protein | 0.25 | ECD_01016 | | rut operon transcriptional repressor for | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF4102 | | Predicted glutamine amidotransferase | 0.26 | GFF3299 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 78 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_04345 | | class II glutamine amidotransferase | 0.26 | IAI46_09055 | | HTH-type transcriptional regulator RutR | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_04350 | | glutamine amidotransferase | 0.33 | AO356_07965 | | TetR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_2711 | | Glutamine amidotransferase, class-II | 0.34 | Pf6N2E2_3465 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 103 |
| Rahnella sp. WP5 | 0.48 | EX31_RS21015 | | class II glutamine amidotransferase | 0.48 | EX31_RS07030 | | TetR family transcriptional regulator | 0.54 | 15 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_00725 | | Putative glutamine amidotransferase YafJ | 0.33 | PFR28_05260 | | HTH-type transcriptional regulator RutR | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_4482 | | Glutamine amidotransferase, class-II | 0.35 | PfGW456L13_5 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.35 | Psyr_0675 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_07455 | | glutamine amidotransferase | 0.34 | PS417_03230 | | TetR family transcriptional regulator | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.35 | Psyr_0675 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.34 | PFLU_RS03310 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_3359 | | Glutamine amidotransferase, class-II | 0.35 | Pf1N1B4_1241 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | — | — |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.34 | PFLU_RS03310 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_17960 | | glutamine amidotransferase | 0.35 | AO353_06095 | | TetR family transcriptional regulator | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_1849 | | Predicted glutamine amidotransferase | 0.33 | Psest_1439 | | Transcriptional regulator | low | > 67 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_05255 | | Putative glutamine amidotransferase YafJ | 0.33 | OH686_07330 | | Transcriptional regulator, AcrR family | low | > 80 |
Not shown: 30 genomes with orthologs for GFF3024 only; 4 genomes with orthologs for GFF4944 only