Conservation of cofitness between PS417_04020 and PS417_24335 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 1.0 PS417_24335 50S rRNA methyltransferase 0.20 13
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5063 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.90 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05430 glycine/betaine ABC transporter substrate-binding protein 0.86 AO353_13950 50S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1132 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.88 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.86 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_07295 glycine/betaine ABC transporter substrate-binding protein 0.86 AO356_15650 50S rRNA methyltransferase low > 104
Pseudomonas sp. RS175 0.82 PFR28_00116 Osmoprotectant-binding protein OsmX 0.86 PFR28_03798 Ribosomal RNA large subunit methyltransferase G low > 88
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas putida KT2440 0.70 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein 0.80 PP_4648 Ribosomal RNA large subunit methyltransferase G low > 96
Pantoea sp. MT58 0.41 IAI47_09775 glycine betaine ABC transporter substrate-binding protein 0.34 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_02068 Osmoprotectant-binding protein OsmX 0.35 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G low > 85
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1488 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 0.35 EX28DRAFT_3153 16S RNA G1207 methylase RsmC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF1780 Putative ABC transporter periplasmic binding protein 0.36 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 78
Erwinia tracheiphila SCR3 0.32 LU632_RS12285 glycine/betaine ABC transporter substrate-binding protein 0.33 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 74
Escherichia coli ECRC102 0.22 NIAGMN_21425 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECOR38 0.22 HEPCGN_02235 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.35 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 85
Escherichia coli ECRC99 0.22 KEDOAH_04525 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC101 0.22 OKFHMN_23660 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC101 0.22 MCAODC_14710 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC98 0.22 JDDGAC_27615 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia fergusonii Becca 0.22 EFB2_01724 Glycine betaine-binding protein YehZ 0.36 EFB2_00728 Ribosomal RNA large subunit methyltransferase G low > 86
Escherichia coli BW25113 0.22 b2131 yehZ predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) 0.35 b3084 ygjO putative enzyme (VIMSS) low > 76
Escherichia coli ECRC62 0.22 BNILDI_14150 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.35 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECOR27 0.22 NOLOHH_15200 osmF glycine betaine ABC transporter substrate-binding protein OsmF 0.36 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 57
Escherichia coli BL21 0.22 ECD_02061 putative ABC transporter periplasmic binding protein 0.35 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent low > 60
Escherichia coli Nissle 1917 0.21 ECOLIN_RS25495 glycine betaine ABC transporter substrate-binding protein OsmF 0.36 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01579 Glycine betaine-binding protein YehZ 0.35 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G low > 73
Klebsiella michiganensis M5al 0.21 BWI76_RS19505 ABC transporter substrate-binding protein 0.34 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase low > 92
Rahnella sp. WP5 0.20 EX31_RS23935 ABC transporter substrate-binding protein 0.33 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 89
Serratia liquefaciens MT49 0.20 IAI46_07365 ABC transporter substrate-binding protein 0.37 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 86
Marinobacter adhaerens HP15 0.17 HP15_991 substrate-binding region of ABC-type glycine betaine transport system 0.25 HP15_2265 rRNA (guanine-N2-)-methyltransferase, RsmD low > 73

Not shown: 12 genomes with orthologs for PS417_04020 only; 12 genomes with orthologs for PS417_24335 only