Conservation of cofitness between PS417_23225 and PS417_24335 in Pseudomonas simiae WCS417

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23225 hypothetical protein 1.0 PS417_24335 50S rRNA methyltransferase 0.17 11
Pseudomonas fluorescens SBW25 0.90 PFLU_RS24880 glycine zipper 2TM domain-containing protein 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS24880 glycine zipper 2TM domain-containing protein 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3010 probable exported protein YPO1624 0.88 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4878 probable exported protein YPO1624 0.90 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 87
Pseudomonas sp. RS175 0.85 PFR28_00281 hypothetical protein 0.86 PFR28_03798 Ribosomal RNA large subunit methyltransferase G low > 88
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_06670 hypothetical protein 0.86 AO356_15650 50S rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3194 probable exported protein YPO1624 0.86 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_15810 hypothetical protein 0.86 AO353_13950 50S rRNA methyltransferase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_1232 conserved hypothetical protein 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_1232 conserved hypothetical protein 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas sp. S08-1 0.75 OH686_17450 hypothetical protein 0.74 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase low > 80
Pseudomonas putida KT2440 0.74 PP_0837 putative regulator of flagellation 0.80 PP_4648 Ribosomal RNA large subunit methyltransferase G low > 96
Pseudomonas stutzeri RCH2 0.67 Psest_1246 Predicted outer membrane lipoprotein 0.72 Psest_3440 16S RNA G1207 methylase RsmC 0.30 48
Escherichia coli ECRC98 0.56 JDDGAC_07150 ycfJ Uncharacterized protein YcfJ 0.36 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 86
Escherichia coli ECRC102 0.56 NIAGMN_24340 ycfJ Uncharacterized protein YcfJ 0.36 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG
Escherichia coli ECRC100 0.56 OKFHMN_03490 ycfJ Uncharacterized protein YcfJ 0.36 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 80
Escherichia coli ECRC101 0.56 MCAODC_22850 ycfJ Uncharacterized protein YcfJ 0.36 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 87
Escherichia coli ECRC99 0.56 KEDOAH_24265 ycfJ Uncharacterized protein YcfJ 0.36 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG
Serratia liquefaciens MT49 0.56 IAI46_09915 glycine zipper 2TM domain-containing protein 0.37 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG
Enterobacter sp. TBS_079 0.55 MPMX20_01791 hypothetical protein 0.35 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G low > 85
Escherichia coli BW25113 0.55 b1110 ycfJ hypothetical protein (NCBI) 0.35 b3084 ygjO putative enzyme (VIMSS) low > 76
Klebsiella michiganensis M5al 0.55 BWI76_RS11180 hypothetical protein 0.34 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase low > 92
Escherichia fergusonii Becca 0.55 EFB2_02865 hypothetical protein 0.36 EFB2_00728 Ribosomal RNA large subunit methyltransferase G low > 86
Escherichia coli Nissle 1917 0.55 ECOLIN_RS06405 glycine zipper 2TM domain-containing protein 0.36 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG
Escherichia coli BL21 0.55 ECD_01106 uncharacterized protein 0.35 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02556 hypothetical protein 0.35 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G low > 73
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1820 Predicted outer membrane lipoprotein 0.35 EX28DRAFT_3153 16S RNA G1207 methylase RsmC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF3393 FIG01200701: possible membrane protein 0.36 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 78
Escherichia coli ECRC62 0.55 BNILDI_19180 ycfJ Uncharacterized protein YcfJ 0.35 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 75
Escherichia coli ECOR27 0.55 NOLOHH_21015 ycfJ Uncharacterized protein YcfJ 0.36 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 75
Escherichia coli ECOR38 0.54 HEPCGN_23995 ycfJ Uncharacterized protein YcfJ 0.35 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 87
Rahnella sp. WP5 0.53 EX31_RS24515 glycine zipper 2TM domain-containing protein 0.33 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 89
Pectobacterium carotovorum WPP14 0.53 HER17_RS08740 glycine zipper 2TM domain-containing protein 0.37 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 75
Erwinia tracheiphila SCR3 0.49 LU632_RS14735 glycine zipper 2TM domain-containing protein 0.33 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 74
Dickeya dianthicola ME23 0.49 DZA65_RS13570 glycine zipper 2TM domain-containing protein 0.34 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS13035 glycine zipper 2TM domain-containing protein 0.34 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 74
Pantoea sp. MT58 0.48 IAI47_11980 glycine zipper 2TM domain-containing protein 0.34 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 76
Dickeya dianthicola 67-19 0.47 HGI48_RS13100 glycine zipper 2TM domain-containing protein 0.33 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 71

Not shown: 3 genomes with orthologs for PS417_23225 only; 7 genomes with orthologs for PS417_24335 only