Conservation of cofitness between PS417_12135 and PS417_24335 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12135 peptidylprolyl isomerase 1.0 PS417_24335 50S rRNA methyltransferase 0.25 7
Pseudomonas fluorescens SBW25 1.00 PFLU_RS12825 peptidyl-prolyl cis-trans isomerase 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS12825 peptidyl-prolyl cis-trans isomerase 0.92 PFLU_RS26260 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_5637 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.88 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_00440 peptidylprolyl isomerase 0.86 AO356_15650 50S rRNA methyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2870 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.90 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.21 74
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_21750 peptidylprolyl isomerase 0.86 AO353_13950 50S rRNA methyltransferase low > 101
Pseudomonas sp. RS175 0.97 PFR28_01391 Peptidyl-prolyl cis-trans isomerase C 0.86 PFR28_03798 Ribosomal RNA large subunit methyltransferase G low > 88
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2045 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.86 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) low > 103
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase low > 86
Pseudomonas putida KT2440 0.92 PP_3070 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.80 PP_4648 Ribosomal RNA large subunit methyltransferase G — —
Pseudomonas stutzeri RCH2 0.84 Psest_2122 Parvulin-like peptidyl-prolyl isomerase 0.72 Psest_3440 16S RNA G1207 methylase RsmC low > 67
Pseudomonas sp. S08-1 0.82 OH686_00765 Peptidyl-prolyl cis-trans isomerase PpiC 0.74 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase low > 80
Shewanella amazonensis SB2B 0.68 Sama_1666 cell wall hydrolase/autolysin (RefSeq) 0.33 Sama_2548 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.62 MIT1002_03923 Peptidyl-prolyl cis-trans isomerase C 0.32 MIT1002_00689 Ribosomal RNA large subunit methyltransferase G low > 70
Pantoea sp. MT58 0.55 IAI47_18550 peptidylprolyl isomerase 0.34 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 76
Escherichia coli ECRC101 0.54 OKFHMN_14620 ppiC peptidylprolyl isomerase PpiC 0.36 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli BL21 0.54 ECD_03653 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.35 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC101 0.54 MCAODC_05125 ppiC peptidylprolyl isomerase PpiC 0.36 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECOR27 0.54 NOLOHH_06755 ppiC peptidylprolyl isomerase PpiC 0.36 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC102 0.54 NIAGMN_12375 ppiC peptidylprolyl isomerase PpiC 0.36 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC98 0.54 JDDGAC_18240 ppiC peptidylprolyl isomerase PpiC 0.36 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS21685 peptidylprolyl isomerase PpiC 0.36 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli BW25113 0.54 b3775 ppiC peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) 0.35 b3084 ygjO putative enzyme (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_04278 Peptidyl-prolyl cis-trans isomerase C 0.35 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G low > 73
Escherichia coli ECRC62 0.54 BNILDI_04770 ppiC peptidylprolyl isomerase PpiC 0.35 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia coli ECRC99 0.54 KEDOAH_13530 ppiC peptidylprolyl isomerase PpiC 0.36 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG — —
Escherichia fergusonii Becca 0.54 EFB2_04861 Peptidyl-prolyl cis-trans isomerase C 0.36 EFB2_00728 Ribosomal RNA large subunit methyltransferase G low > 86
Serratia liquefaciens MT49 0.54 IAI46_00560 peptidylprolyl isomerase 0.37 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4448 PPIC-type PPIASE domain 0.35 EX28DRAFT_3153 16S RNA G1207 methylase RsmC low > 76
Klebsiella michiganensis M5al 0.53 BWI76_RS01000 peptidyl-prolyl cis-trans isomerase 0.34 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase low > 92
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_18890 peptidyl-prolyl cis-trans isomerase 0.33 CSW01_11685 ribosomal RNA large subunit methyltransferase G low > 62
Escherichia coli ECOR38 0.51 HEPCGN_13330 ppiC peptidylprolyl isomerase PpiC 0.35 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG low > 85

Not shown: 1 genomes with orthologs for PS417_12135 only; 12 genomes with orthologs for PS417_24335 only