Conservation of cofitness between GFF5044 and GFF4454 in Hydrogenophaga sp. GW460-11-11-14-LB1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 1.0 GFF4454 Transcriptional regulator, LacI family 0.56 2
Variovorax sp. SCN45 0.68 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl 0.24 GFF2137 Ribose operon repressor low > 127
Variovorax sp. OAS795 0.68 ABID97_RS02980 CysB family HTH-type transcriptional regulator 0.25 ABID97_RS24770 LacI family DNA-binding transcriptional regulator low > 91
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS08245 CysB family transcriptional regulator 0.25 HSERO_RS11495 LacI family transcription regulator low > 78
Rahnella sp. WP5 0.52 EX31_RS07160 HTH-type transcriptional regulator Cbl 0.24 EX31_RS06195 ribose operon transcriptional repressor RbsR low > 89
Escherichia coli ECRC62 0.51 BNILDI_14895 cbl HTH-type transcriptional regulator Cbl 0.25 BNILDI_04665 rbsR ribose operon transcriptional repressor RbsR low > 75
Escherichia coli ECRC98 0.51 JDDGAC_29285 cbl HTH-type transcriptional regulator Cbl 0.25 JDDGAC_18345 rbsR ribose operon transcriptional repressor RbsR low > 86
Escherichia coli ECRC102 0.51 NIAGMN_22660 cbl HTH-type transcriptional regulator Cbl 0.25 NIAGMN_12480 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC99 0.51 KEDOAH_02955 cbl HTH-type transcriptional regulator Cbl 0.25 KEDOAH_13425 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC101 0.51 MCAODC_20235 cbl HTH-type transcriptional regulator Cbl 0.25 MCAODC_05230 rbsR ribose operon transcriptional repressor RbsR low > 87
Escherichia coli BW25113 0.51 b1987 cbl DNA-binding transcriptional activator of cysteine biosynthesis (NCBI) 0.25 b3753 rbsR DNA-binding transcriptional repressor of ribose metabolism (NCBI) low > 76
Escherichia coli Nissle 1917 0.51 ECOLIN_RS11475 HTH-type transcriptional regulator Cbl 0.25 ECOLIN_RS21575 ribose operon transcriptional repressor RbsR low > 55
Escherichia fergusonii Becca 0.51 EFB2_01926 HTH-type transcriptional regulator cbl 0.25 EFB2_04880 Ribose operon repressor low > 86
Escherichia coli BL21 0.51 ECD_01897 ssuEADCB/tauABCD operon transcriptional activator 0.25 ECD_03639 transcriptional repressor of ribose metabolism low > 61
Escherichia coli ECRC100 0.51 OKFHMN_25155 cbl HTH-type transcriptional regulator Cbl 0.25 OKFHMN_14725 rbsR ribose operon transcriptional repressor RbsR low > 80
Escherichia coli ECOR38 0.51 HEPCGN_03490 cbl HTH-type transcriptional regulator Cbl 0.25 HEPCGN_13435 rbsR ribose operon transcriptional repressor RbsR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01721 HTH-type transcriptional regulator cbl 0.24 OHPLBJKB_04117 HTH-type transcriptional repressor CytR low > 73
Escherichia coli ECOR27 0.50 NOLOHH_16065 cbl HTH-type transcriptional regulator Cbl 0.25 NOLOHH_06860 rbsR ribose operon transcriptional repressor RbsR low > 75
Erwinia tracheiphila SCR3 0.49 LU632_RS14875 cbl HTH-type transcriptional regulator Cbl 0.23 LU632_RS19660 cytR DNA-binding transcriptional regulator CytR low > 74
Pantoea sp. MT58 0.49 IAI47_07575 HTH-type transcriptional regulator Cbl 0.26 IAI47_00375 ribose operon transcriptional repressor RbsR low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_02501 HTH-type transcriptional regulator CysB 0.25 MPMX20_04614 Ribose operon repressor — —
Dickeya dianthicola 67-19 0.48 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.24 HGI48_RS21310 ribose operon transcriptional repressor RbsR low > 71
Klebsiella michiganensis M5al 0.48 BWI76_RS11930 LysR family transcriptional regulator CysB 0.26 BWI76_RS07435 LacI family transcriptional regulator — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0946 Transcriptional regulator 0.25 EX28DRAFT_4029 transcriptional regulator, LacI family — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS10870 HTH-type transcriptional regulator CysB 0.25 HER17_RS21525 ribose operon transcriptional repressor RbsR low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.25 DDA3937_RS00055 ribose operon transcriptional repressor RbsR low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS07870 HTH-type transcriptional regulator Cbl 0.22 DZA65_RS16225 LacI family transcriptional regulator low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF2712 Cys regulon transcriptional activator CysB 0.25 GFF1704 Ribose operon repressor — —
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_09545 HTH-type transcriptional regulator CysB 0.24 CSW01_13525 DNA-binding transcriptional regulator CytR — —
Shewanella sp. ANA-3 0.47 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.18 Shewana3_2252 LacI family transcription regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.47 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.18 SO2244 transcriptional regulator, LacI family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.17 Shew_1870 LacI family transcription regulator (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_05975 lysR CysB family transcriptional regulator 0.24 OKGIIK_15435 LacI family transcriptional regulator low > 52
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.27 ABZR86_RS01690 LacI family DNA-binding transcriptional regulator low > 74
Lysobacter sp. OAE881 0.31 ABIE51_RS15850 LysR family transcriptional regulator 0.25 ABIE51_RS08800 LacI family DNA-binding transcriptional regulator low > 62

Not shown: 31 genomes with orthologs for GFF5044 only; 15 genomes with orthologs for GFF4454 only