Conservation of cofitness between PS417_22115 and PS417_19965 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22115 transcriptional regulator 1.0 PS417_19965 histidine kinase 0.29 2
Pseudomonas fluorescens SBW25 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.98 PFLU_RS21935 sensor histidine kinase 0.50 68
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.98 PFLU_RS21935 sensor histidine kinase 0.41 3
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family 0.90 PfGW456L13_4223 Sensory box histidine kinase/response regulator 0.36 7
Pseudomonas sp. RS175 0.96 PFR28_00572 HTH-type transcriptional regulator HexR 0.89 PFR28_03189 Sensor histidine kinase RcsC low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05165 transcriptional regulator 0.89 AO356_19225 histidine kinase 0.46 4
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family 0.89 Pf6N2E2_5760 Sensory box histidine kinase/response regulator low > 103
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_03365 transcriptional regulator 0.90 AO353_02555 histidine kinase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.84 Psyr_1585 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.84 Psyr_1585 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 0.32 45
Pseudomonas putida KT2440 0.88 PP_1021 DNA-binding transcriptional regulator 0.85 PP_1695 putative Sodium-solute symporter/sensory box histidine kinase/response regulator low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_0851 Transcriptional regulators 0.78 Psest_1527 Na+/proline symporter low > 67
Pseudomonas sp. S08-1 0.87 OH686_02440 Phosphogluconate repressor HexR, RpiR family 0.78 OH686_19595 Two-component system sensor histidine kinase low > 80
Marinobacter adhaerens HP15 0.61 HP15_2180 transcriptional regulator, RpiR family protein 0.42 HP15_1249 two-component system sensor protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05825 transcriptional regulator HexR 0.47 CSW01_01545 hybrid sensor histidine kinase/response regulator low > 62
Shewanella amazonensis SB2B 0.57 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) 0.43 Sama_2078 sensor histidine kinase/response regulator (RefSeq) low > 62
Shewanella oneidensis MR-1 0.56 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) 0.44 SO2742 sensor histidine kinase/response regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) 0.43 Shewana3_2522 multi-sensor hybrid histidine kinase (RefSeq) low > 73
Shewanella loihica PV-4 0.55 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) 0.43 Shew_1534 integral membrane sensor hybrid histidine kinase (RefSeq) 0.42 55
Alteromonas macleodii MIT1002 0.52 MIT1002_02408 putative HTH-type transcriptional regulator YbbH 0.33 MIT1002_03509 Aerobic respiration control sensor protein ArcB — —
Azospirillum sp. SherDot2 0.31 MPMX19_05117 HTH-type transcriptional regulator HexR 0.37 MPMX19_05508 Sensor histidine kinase RcsC low > 112

Not shown: 26 genomes with orthologs for PS417_22115 only; 13 genomes with orthologs for PS417_19965 only