Conservation of cofitness between PS417_16995 and PS417_19635 in Pseudomonas simiae WCS417

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16995 LysR family transcriptional regulator 1.0 PS417_19635 lipid kinase 0.20 20
Pseudomonas fluorescens SBW25 0.99 PFLU_RS18945 LysR family transcriptional regulator 0.98 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS18945 LysR family transcriptional regulator 0.98 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_01560 LysR family transcriptional regulator 0.76 AO356_02970 lipid kinase low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3992 Transcriptional regulator, LysR family 0.79 Pf1N1B4_233 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_2187 Transcriptional regulator, LysR family 0.75 Pf6N2E2_2419 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 103
Pseudomonas sp. RS175 0.94 PFR28_01264 PCP degradation transcriptional activation protein 0.75 PFR28_01008 putative lipid kinase YegS low > 88
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_2596 Transcriptional regulator, LysR family 0.75 PfGW456L13_2276 Transcription regulator [contains diacylglycerol kinase catalytic domain] 0.36 41
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_2473 transcriptional regulator, LysR family 0.76 Psyr_3300 Conserved hypothetical protein 147 0.23 83
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_2473 transcriptional regulator, LysR family 0.76 Psyr_3300 Conserved hypothetical protein 147 low > 86
Pseudomonas putida KT2440 0.85 PP_2436 Transcriptional regulator, LysR family 0.70 PP_2125 lipid kinase low > 96
Pseudomonas sp. S08-1 0.83 OH686_00880 Transcriptional regulator, LysR family 0.65 OH686_21825 lipid kinase YegS low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_2127 Transcriptional regulator 0.58 Psest_1841 lipid kinase YegS low > 67
Shewanella loihica PV-4 0.46 Shew_2857 LysR family transcriptional regulator (RefSeq) 0.26 Shew_3345 lipid kinase (RefSeq) low > 60
Rhizobium sp. OAE497 0.31 ABIE40_RS05450 LysR family transcriptional regulator 0.14 ABIE40_RS04240 diacylglycerol kinase family protein low > 107
Serratia liquefaciens MT49 0.26 IAI46_12655 LysR family transcriptional regulator 0.40 IAI46_19020 lipid kinase YegS low > 86
Rahnella sp. WP5 0.26 EX31_RS20430 LysR family transcriptional regulator 0.42 EX31_RS20330 lipid kinase YegS low > 89
Enterobacter asburiae PDN3 0.25 EX28DRAFT_1151 Transcriptional regulator 0.38 EX28DRAFT_0475 lipid kinase YegS low > 76
Enterobacter sp. TBS_079 0.24 MPMX20_02333 Nodulation protein D 2 0.37 MPMX20_03070 putative lipid kinase YegS low > 85
Pantoea sp. MT58 0.24 IAI47_19555 LysR family transcriptional regulator 0.39 IAI47_06840 lipid kinase YegS low > 76
Klebsiella michiganensis M5al 0.23 BWI76_RS03630 LysR family transcriptional regulator 0.40 BWI76_RS19285 lipid kinase YegS low > 92
Escherichia coli ECOR27 0.22 NOLOHH_03050 leuO transcriptional regulator LeuO 0.40 NOLOHH_15485 yegS lipid kinase YegS low > 75
Escherichia coli BW25113 0.22 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) 0.40 b2086 yegS hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.22 MCAODC_01220 leuO transcriptional regulator LeuO 0.40 MCAODC_21005 yegS lipid kinase YegS low > 87
Escherichia coli ECRC102 0.22 NIAGMN_08555 leuO transcriptional regulator LeuO 0.40 NIAGMN_22095 yegS lipid kinase YegS — —
Escherichia coli BL21 0.22 ECD_00078 global transcription factor 0.40 ECD_02015 phosphatidylglycerol kinase, metal-dependent — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO 0.40 OHPLBJKB_01621 Lipid kinase YegS low > 73
Escherichia coli ECRC62 0.22 BNILDI_08560 leuO transcriptional regulator LeuO 0.40 BNILDI_14400 yegS lipid kinase YegS low > 75
Escherichia coli ECRC99 0.22 KEDOAH_17450 leuO transcriptional regulator LeuO 0.40 KEDOAH_04000 yegS lipid kinase YegS — —
Escherichia coli ECRC100 0.22 OKFHMN_10705 leuO transcriptional regulator LeuO 0.40 OKFHMN_24150 yegS lipid kinase YegS low > 80
Escherichia coli ECRC98 0.22 JDDGAC_14300 leuO transcriptional regulator LeuO 0.40 JDDGAC_28260 yegS lipid kinase YegS low > 86
Escherichia coli Nissle 1917 0.21 ECOLIN_RS00410 transcriptional regulator LeuO 0.40 ECOLIN_RS12265 lipid kinase YegS low > 55
Escherichia fergusonii Becca 0.21 EFB2_03970 HTH-type transcriptional regulator LeuO 0.40 EFB2_01768 Lipid kinase YegS low > 86
Escherichia coli ECOR38 0.21 HEPCGN_08685 leuO transcriptional regulator LeuO 0.40 HEPCGN_02830 yegS lipid kinase YegS low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF162 Probable transcriptional activator for leuABCD operon 0.39 GFF3840 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 78

Not shown: 27 genomes with orthologs for PS417_16995 only; 11 genomes with orthologs for PS417_19635 only