Conservation of cofitness between PS417_27710 and PS417_18705 in Pseudomonas simiae WCS417

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27710 AsnC family transcriptional regulator 1.0 PS417_18705 succinate dehydrogenase 0.24 11
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.95 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.95 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens FW300-N1B4 1.00 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.77 Pf1N1B4_5616 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.78 PfGW456L13_3880 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas putida KT2440 0.97 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.72 PP_3151 NAD+-dependent succinate semialdehyde dehydrogenase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.74 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.74 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.80 Xcc-8004.4622.1 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.43 Xcc-8004.2214.1 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04288 transcriptional regulator, AsnC family 0.57 H281DRAFT_00057 succinate semialdehyde dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.70 ABIE53_003132 Lrp/AsnC family leucine-responsive transcriptional regulator 0.58 ABIE53_001753 succinate-semialdehyde dehydrogenase low > 113
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS04195 Lrp/AsnC ligand binding domain-containing protein 0.34 QEN71_RS38495 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Variovorax sp. OAS795 0.61 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.44 ABID97_RS19050 NAD-dependent succinate-semialdehyde dehydrogenase low > 91
Variovorax sp. SCN45 0.61 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.44 GFF713 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) low > 127
Erwinia tracheiphila SCR3 0.59 LU632_RS09740 lrp leucine-responsive transcriptional regulator Lrp 0.40 LU632_RS10125 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Pantoea sp. MT58 0.59 IAI47_12915 leucine-responsive transcriptional regulator Lrp 0.59 IAI47_21330 aldehyde dehydrogenase family protein low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS09655 leucine-responsive regulatory protein 0.69 BWI76_RS15205 succinate-semialdehyde dehydrogenase low > 92
Escherichia coli ECRC101 0.59 MCAODC_24965 lrp leucine-responsive transcriptional regulator Lrp 0.64 MCAODC_16815 sad succinate-semialdehyde dehydrogenase
Escherichia coli ECRC99 0.59 KEDOAH_22160 lrp leucine-responsive transcriptional regulator Lrp 0.64 KEDOAH_27320 sad succinate-semialdehyde dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4893 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.64 GFF2511 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Escherichia coli ECRC98 0.59 JDDGAC_09385 lrp leucine-responsive transcriptional regulator Lrp 0.64 JDDGAC_03620 sad succinate-semialdehyde dehydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_02779 Leucine-responsive regulatory protein 0.64 OHPLBJKB_02194 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 73
Escherichia coli BW25113 0.59 b0889 lrp DNA-binding transcriptional dual regulator, leucine-binding (NCBI) 0.64 b1525 b1525 putative aldehyde dehydrogenase (VIMSS) low > 76
Escherichia coli ECRC102 0.59 NIAGMN_03295 lrp leucine-responsive transcriptional regulator Lrp 0.64 NIAGMN_25255 sad succinate-semialdehyde dehydrogenase
Escherichia coli Nissle 1917 0.59 ECOLIN_RS04730 leucine-responsive transcriptional regulator Lrp 0.64 ECOLIN_RS08710 succinate-semialdehyde dehydrogenase
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2043 transcriptional regulator, AsnC family 0.68 EX28DRAFT_1198 NAD-dependent aldehyde dehydrogenases low > 76
Escherichia coli ECRC101 0.59 OKFHMN_05575 lrp leucine-responsive transcriptional regulator Lrp 0.64 OKFHMN_01110 sad succinate-semialdehyde dehydrogenase
Escherichia coli ECOR27 0.59 NOLOHH_22145 lrp leucine-responsive transcriptional regulator Lrp 0.64 NOLOHH_18760 sad succinate-semialdehyde dehydrogenase low > 57
Enterobacter sp. TBS_079 0.59 MPMX20_01551 Leucine-responsive regulatory protein 0.67 MPMX20_02269 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 85
Escherichia coli BL21 0.59 ECD_00893 leucine-responsive global transcriptional regulator 0.64 ECD_01482 succinate semialdehyde dehydrogenase, NAD(P)+-dependent low > 60
Escherichia fergusonii Becca 0.59 EFB2_03172 Leucine-responsive regulatory protein 0.64 EFB2_02435 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 86
Escherichia coli ECOR38 0.59 HEPCGN_22935 lrp leucine-responsive transcriptional regulator Lrp 0.64 HEPCGN_26650 sad succinate-semialdehyde dehydrogenase low > 85
Escherichia coli ECRC62 0.59 BNILDI_20400 lrp leucine-responsive transcriptional regulator Lrp 0.65 BNILDI_17240 sad succinate-semialdehyde dehydrogenase
Rahnella sp. WP5 0.59 EX31_RS18530 leucine-responsive transcriptional regulator Lrp 0.69 EX31_RS00180 aldehyde dehydrogenase family protein low > 89
Alteromonas macleodii MIT1002 0.55 MIT1002_02181 Leucine-responsive regulatory protein 0.42 MIT1002_03989 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS13055 Lrp/AsnC ligand binding domain-containing protein 0.38 A4249_RS12765 NAD-dependent succinate-semialdehyde dehydrogenase low > 48
Acinetobacter radioresistens SK82 0.45 MPMX26_01467 Leucine-responsive regulatory protein 0.37 MPMX26_00106 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
Phaeobacter inhibens DSM 17395 0.37 PGA1_c11760 putative proline dehydrogenase transcriptional activator 0.39 PGA1_262p00540 succinate-semialdehyde dehdyrogenase GabD low > 62

Not shown: 41 genomes with orthologs for PS417_27710 only; 7 genomes with orthologs for PS417_18705 only