Conservation of cofitness between GFF5234 and GFF335 in Variovorax sp. SCN45

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF5234 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) 1.0 GFF335 Cytosine deaminase (EC 3.5.4.1) 0.46 16
Variovorax sp. OAS795 0.93 ABID97_RS06945 ATPase, T2SS/T4P/T4SS family 0.93 ABID97_RS16895 amidohydrolase family protein low > 91
Acidovorax sp. GW101-3H11 0.78 Ac3H11_2029 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) 0.77 Ac3H11_2437 Cytosine deaminase (EC 3.5.4.1) low > 79
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS29515 type II secretion system ATPase GspE 0.71 QEN71_RS05690 amidohydrolase family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_02355 type II secretion system protein E (GspE) 0.73 H281DRAFT_00460 cytosine deaminase low > 103
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS07745 type II secretion system protein GspE 0.73 RALBFv3_RS01695 cytosine deaminase low > 76
Ralstonia solanacearum GMI1000 0.62 RS_RS15645 type II secretion system protein GspE 0.74 RS_RS08030 cytosine deaminase low > 80
Ralstonia solanacearum UW163 0.62 UW163_RS05880 type II secretion system protein GspE 0.73 UW163_RS15005 cytosine deaminase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS09515 type II secretion system protein GspE 0.73 RPSI07_RS15790 cytosine deaminase low > 81
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS19525 general secretion pathway protein GspE 0.72 RR42_RS30785 cytosine deaminase low > 128
Dickeya dianthicola ME23 0.52 DZA65_RS15675 type II secretion system ATPase GspE 0.38 DZA65_RS18425 cytosine deaminase low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS14730 type II secretion system ATPase GspE 0.38 HGI48_RS17335 cytosine deaminase low > 71
Dickeya dadantii 3937 0.52 DDA3937_RS14795 type II secretion system ATPase GspE 0.38 DDA3937_RS17280 cytosine deaminase low > 74
Klebsiella michiganensis M5al 0.51 BWI76_RS05085 general secretion pathway protein GspE 0.43 BWI76_RS26030 cytosine deaminase low > 92
Marinobacter adhaerens HP15 0.51 HP15_1602 type II secretion system protein E 0.38 HP15_2772 N-isopropylammelide isopropylaminohydrolase low > 73
Pseudomonas stutzeri RCH2 0.51 Psest_4202 general secretory pathway protein E 0.38 Psest_0773 Cytosine deaminase and related metal-dependent hydrolases low > 67
Escherichia coli ECRC98 0.50 JDDGAC_30300 gspE type II secretion system ATPase GspE 0.43 JDDGAC_12500 codA cytosine/isoguanine deaminase low > 86
Escherichia coli ECRC101 0.50 MCAODC_15270 gspE type II secretion system ATPase GspE 0.43 MCAODC_28075 codA cytosine/isoguanine deaminase low > 87
Escherichia coli ECRC100 0.50 OKFHMN_00280 gspE type II secretion system ATPase GspE 0.43 OKFHMN_08845 codA cytosine/isoguanine deaminase low > 80
Escherichia coli ECRC102 0.50 NIAGMN_28600 gspE type II secretion system ATPase GspE 0.43 NIAGMN_06900 codA cytosine/isoguanine deaminase — —
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_12550 type II secretion system protein GspE 0.39 AO353_19755 cytosine deaminase low > 101
Rahnella sp. WP5 0.50 EX31_RS16170 type II secretion system ATPase GspE 0.44 EX31_RS04665 cytosine deaminase low > 89
Escherichia fergusonii Becca 0.49 EFB2_00846 Type II secretion system protein E 0.43 EFB2_03701 Cytosine deaminase low > 86
Escherichia coli BL21 0.49 ECD_02837 putative type II secretion protein GspE 0.43 ECD_00291 cytosine/isoguanine deaminase low > 61
Escherichia coli ECOR38 0.49 HEPCGN_18055 gspE general secretion pathway protein E 0.44 HEPCGN_07460 codA cytosine/isoguanine deaminase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00377 Putative type II secretion system protein E 0.44 OHPLBJKB_03334 Cytosine deaminase low > 73
Escherichia coli BW25113 0.49 b3326 gspE general secretory pathway component, cryptic (NCBI) 0.43 b0337 codA cytosine deaminase (NCBI) low > 76
Escherichia coli ECOR27 0.49 NOLOHH_10980 gspE general secretion pathway protein E 0.44 NOLOHH_01745 codA cytosine/isoguanine deaminase low > 75
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_265 General secretion pathway protein E 0.39 PfGW456L13_2445 Cytosine deaminase (EC 3.5.4.1) low > 87
Escherichia coli Nissle 1917 0.49 ECOLIN_RS19065 type II secretion system ATPase GspE 0.43 ECOLIN_RS02175 cytosine/isoguanine deaminase low > 55
Enterobacter sp. TBS_079 0.48 MPMX20_01516 Putative type II secretion system protein E 0.42 MPMX20_04268 Cytosine deaminase low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2078 type II secretion system protein E 0.43 EX28DRAFT_4163 Cytosine deaminase and related metal-dependent hydrolases low > 76
Pseudomonas putida KT2440 0.46 PP_1047 putative protein secretion protein for export 0.38 PP_3189 cytosine deaminase / isoguanine deaminase low > 96

Not shown: 12 genomes with orthologs for GFF5234 only; 23 genomes with orthologs for GFF335 only