Conservation of cofitness between Psest_0998 and Psest_3166 in Pseudomonas stutzeri RCH2

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0998 poly(A) polymerase 1.0 Psest_3166 Superfamily II DNA and RNA helicases 0.25 14
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_14395 poly(A) polymerase 0.79 AO353_04625 ATP-dependent RNA helicase RhlB 0.47 2
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_16070 poly(A) polymerase 0.79 AO356_17370 ATP-dependent RNA helicase RhlB 0.24 66
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.76 Pf1N1B4_920 ATP-dependent RNA helicase RhlB 0.51 6
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.79 Pf6N2E2_5400 ATP-dependent RNA helicase RhlB 0.40 41
Pseudomonas sp. RS175 0.77 PFR28_03719 Poly(A) polymerase I 0.79 PFR28_03544 ATP-dependent RNA helicase RhlB low > 88
Pseudomonas simiae WCS417 0.77 PS417_23900 poly(A) polymerase 0.78 PS417_04890 ATP-dependent RNA helicase RhlB low > 88
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.77 PfGW456L13_1696 ATP-dependent RNA helicase RhlB 0.42 2
Pseudomonas fluorescens SBW25 0.76 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.76 PFLU_RS04950 ATP-dependent RNA helicase RhlB low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.76 PFLU_RS04950 ATP-dependent RNA helicase RhlB low > 109
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_0830 Poly(A) polymerase 0.76 Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_0830 Poly(A) polymerase 0.76 Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas sp. S08-1 0.76 OH686_17255 Poly(A) polymerase 0.80 OH686_17780 ATP-dependent RNA helicase RhlB 0.80 68
Pseudomonas putida KT2440 0.72 PP_4697 poly(A) polymerase 0.78 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Marinobacter adhaerens HP15 0.47 HP15_326 polyA polymerase 0.46 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.33 CSW01_01555 ATP-dependent RNA helicase RhlB low > 62
Dickeya dadantii 3937 0.42 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.35 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola ME23 0.42 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.35 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.35 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Enterobacter sp. TBS_079 0.41 MPMX20_00829 Poly(A) polymerase I 0.35 MPMX20_04492 ATP-dependent RNA helicase RhlB 0.33 24
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3732 poly(A) polymerase 0.35 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.35 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Escherichia coli BW25113 0.40 b0143 pcnB poly(A) polymerase I (VIMSS) 0.34 b3780 rhlB ATP-dependent RNA helicase (NCBI) 0.34 12
Escherichia coli Nissle 1917 0.40 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.34 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 52
Escherichia coli BL21 0.40 ECD_00142 poly(A) polymerase 0.34 ECD_03658 ATP-dependent RNA helicase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03519 Poly(A) polymerase I 0.34 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 73
Escherichia coli ECOR27 0.40 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.34 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 57
Escherichia coli ECOR38 0.40 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.35 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 85
Escherichia coli ECRC62 0.40 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.34 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia fergusonii Becca 0.40 EFB2_03901 Poly(A) polymerase I 0.34 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Pantoea sp. MT58 0.40 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.35 IAI47_18535 ATP-dependent RNA helicase RhlB 0.38 49

Not shown: 32 genomes with orthologs for Psest_0998 only; 1 genomes with orthologs for Psest_3166 only