Conservation of cofitness between Psest_0192 and Psest_3100 in Pseudomonas stutzeri RCH2

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0192 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 1.0 Psest_3100 RNA polymerase sigma factor RpoE 0.60 8
Pseudomonas simiae WCS417 0.84 PS417_00450 chemotaxis protein CheY 0.94 PS417_07120 RNA polymerase sigma-H factor 0.23 64
Pseudomonas putida KT2440 0.83 PP_0133 Alginate biosynthesis transcriptional regulatory protein AlgB 0.94 PP_1427 RNA polymerase sigma E factor 0.12 55
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0263 Two-component response regulator AlgB 0.94 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0263 Two-component response regulator AlgB 0.94 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.44 3
Pseudomonas fluorescens SBW25 0.83 PFLU_RS00440 sigma-54-dependent Fis family transcriptional regulator 0.94 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS00440 sigma-54-dependent Fis family transcriptional regulator 0.94 PFLU_RS07230 RNA polymerase sigma factor RpoE 0.72 8
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_11415 chemotaxis protein CheY 0.94 AO356_04575 RNA polymerase subunit sigma 0.58 3
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4152 alginate biosynthesis transcriptional regulatory protein AlgB 0.94 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT 0.63 6
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_10980 chemotaxis protein CheY 0.94 AO353_17625 RNA polymerase subunit sigma low > 101
Pseudomonas sp. RS175 0.83 PFR28_04634 Alginate biosynthesis transcriptional regulatory protein AlgB 0.94 PFR28_00690 RNA polymerase sigma-H factor 0.53 10
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_584 alginate biosynthesis transcriptional regulatory protein AlgB 0.94 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT low > 87
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1885 alginate biosynthesis transcriptional regulatory protein AlgB 0.94 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT — —
Pseudomonas sp. S08-1 0.79 OH686_12145 Alginate biosynthesis two-component system response regulator AlgB 0.94 OH686_20045 RNA polymerase sigma factor RpoE low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_02275 sigma-54-dependent Fis family transcriptional regulator 0.26 CA264_11965 RNA polymerase subunit sigma low > 74
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS04010 sigma-54 dependent transcriptional regulator 0.67 ABZR86_RS07180 RNA polymerase sigma factor RpoE low > 74
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS12105 sigma-54 dependent transcriptional regulator 0.68 LRK54_RS16940 RNA polymerase sigma factor RpoE low > 59
Rhodanobacter denitrificans MT42 0.33 LRK55_RS11840 sigma-54 dependent transcriptional regulator 0.68 LRK55_RS16655 RNA polymerase sigma factor RpoE — —
Rahnella sp. WP5 0.33 EX31_RS02520 sigma-54-dependent Fis family transcriptional regulator 0.66 EX31_RS21800 RNA polymerase sigma factor RpoE — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0521 PEP-CTERM-box response regulator transcription factor 0.70 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE low > 40
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS13700 Fis family transcriptional regulator 0.62 HSERO_RS09625 RNA polymerase sigma factor RpoE — —
Dickeya dianthicola ME23 0.31 DZA65_RS00425 sigma-54-dependent Fis family transcriptional regulator 0.65 DZA65_RS16930 RNA polymerase sigma factor RpoE low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS00425 two-component system response regulator VfmH 0.65 HGI48_RS15850 RNA polymerase sigma factor RpoE low > 71

Not shown: 4 genomes with orthologs for Psest_0192 only; 60 genomes with orthologs for Psest_3100 only