Conservation of cofitness between PS417_26370 and PS417_15310 in Pseudomonas simiae WCS417

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26370 RNA helicase 1.0 PS417_15310 type VI secretion protein 0.37 15
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13770 ATP-dependent RNA helicase 0.66 AO356_12145 type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA 0.66 Pf6N2E2_4301 Protein ImpG/VasA low > 103
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA 0.70 Pf1N1B4_2086 Protein ImpG/VasA low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_07850 ATP-dependent RNA helicase 0.69 AO353_09425 type VI secretion protein low > 101
Pseudomonas putida KT2440 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA 0.33 PP_4077 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_0344 Superfamily II DNA and RNA helicases 0.65 Psest_0127 type VI secretion protein, VC_A0110 family low > 67
Pseudomonas sp. S08-1 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA 0.64 OH686_12825 T6SS component TssF (ImpG/VasA) low > 80
Marinobacter adhaerens HP15 0.59 HP15_1329 DEAD/DEAH box helicase domain protein 0.39 HP15_3473 type VI secretion system, VCA0110 low > 73
Variovorax sp. OAS795 0.58 ABID97_RS02340 ATP-dependent RNA helicase DbpA 0.28 ABID97_RS12940 type VI secretion system baseplate subunit TssF low > 91
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS00295 DEAD/DEAH box helicase 0.24 RR42_RS22110 type VI secretion protein ImpG low > 128
Pectobacterium carotovorum WPP14 0.57 HER17_RS06775 ATP-dependent RNA helicase DbpA 0.34 HER17_RS04855 type VI secretion system baseplate subunit TssF low > 75
Rahnella sp. WP5 0.55 EX31_RS24740 ATP-dependent RNA helicase DbpA 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF low > 89
Dickeya dadantii 3937 0.53 DDA3937_RS11045 ATP-dependent RNA helicase DbpA 0.33 DDA3937_RS07030 type VI secretion system baseplate subunit TssF low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS11065 ATP-dependent RNA helicase DbpA 0.33 HGI48_RS07960 type VI secretion system baseplate subunit TssF low > 71
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1006 Superfamily II DNA and RNA helicases 0.23 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family low > 76
Dickeya dianthicola ME23 0.53 DZA65_RS11470 ATP-dependent RNA helicase DbpA 0.34 DZA65_RS08555 type VI secretion system baseplate subunit TssF low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA 0.22 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF — —
Escherichia coli ECOR27 0.52 NOLOHH_19875 dbpA ATP-dependent RNA helicase DbpA 0.29 NOLOHH_02230 tssF Type VI secretion system protein TssF — —
Enterobacter sp. TBS_079 0.52 MPMX20_02441 ATP-dependent RNA helicase DbpA 0.22 MPMX20_01644 hypothetical protein low > 85
Escherichia fergusonii Becca 0.52 EFB2_02584 ATP-dependent RNA helicase DbpA 0.22 EFB2_01077 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02338 ATP-dependent RNA helicase DbpA 0.29 OHPLBJKB_03430 hypothetical protein low > 73
Escherichia coli ECRC101 0.52 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA 0.29 OKFHMN_09870 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC99 0.52 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA 0.29 KEDOAH_18280 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC101 0.52 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA 0.29 MCAODC_00390 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC102 0.52 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA 0.29 NIAGMN_07720 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC98 0.52 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA 0.29 JDDGAC_13470 tssF Type VI secretion system protein TssF — —
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12980 ATP-dependent RNA helicase DbpA 0.34 CSW01_14565 type VI secretion system baseplate subunit TssF low > 62
Pantoea sp. MT58 0.50 IAI47_15055 ATP-dependent RNA helicase DbpA 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS11995 dbpA ATP-dependent RNA helicase DbpA 0.33 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF low > 74

Not shown: 38 genomes with orthologs for PS417_26370 only; 0 genomes with orthologs for PS417_15310 only