Conservation of cofitness between GFF2835 and GFF2842 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2835 Putative membrane protein 1.0 GFF2842 Transcriptional regulator KdgR, KDG operon repressor 0.51 16
Escherichia coli ECRC101 0.93 MCAODC_18900 mntP manganese efflux pump MntP 0.96 MCAODC_18925 kdgR DNA-binding transcriptional regulator KdgR low > 87
Escherichia coli ECRC62 0.93 BNILDI_15810 mntP manganese efflux pump MntP 0.96 BNILDI_15785 kdgR DNA-binding transcriptional regulator KdgR low > 75
Escherichia coli ECRC98 0.93 JDDGAC_01080 mntP manganese efflux pump MntP 0.96 JDDGAC_01055 kdgR DNA-binding transcriptional regulator KdgR low > 86
Escherichia fergusonii Becca 0.93 EFB2_02179 putative manganese efflux pump MntP 0.96 EFB2_02174 Transcriptional regulator KdgR low > 86
Escherichia coli BL21 0.93 ECD_01791 putative Mn(2+) efflux pump, mntR-regulated 0.96 ECD_01798 KDG regulon transcriptional repressor — —
Escherichia coli BW25113 0.93 b1821 b1821 orf, hypothetical protein (VIMSS) 0.96 b1827 kdgR predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC99 0.93 KEDOAH_01600 mntP manganese efflux pump MntP 0.96 KEDOAH_01625 kdgR DNA-binding transcriptional regulator KdgR — —
Escherichia coli Nissle 1917 0.93 ECOLIN_RS10135 manganese efflux pump MntP 0.96 ECOLIN_RS10175 DNA-binding transcriptional regulator KdgR — —
Escherichia coli ECRC100 0.93 OKFHMN_26505 mntP manganese efflux pump MntP 0.96 OKFHMN_26480 kdgR DNA-binding transcriptional regulator KdgR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_01909 putative manganese efflux pump MntP 0.96 OHPLBJKB_01904 Transcriptional regulator KdgR low > 73
Escherichia coli ECRC102 0.93 NIAGMN_01555 mntP manganese efflux pump MntP 0.96 NIAGMN_01580 kdgR DNA-binding transcriptional regulator KdgR — —
Escherichia coli ECOR38 0.92 HEPCGN_04905 mntP manganese efflux pump MntP 0.96 HEPCGN_04880 kdgR DNA-binding transcriptional regulator KdgR low > 87
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0738 Predicted membrane protein 0.95 EX28DRAFT_0729 transcriptional regulator, IclR family low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_02726 putative manganese efflux pump MntP 0.94 MPMX20_02734 Transcriptional regulator KdgR low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS17915 membrane protein 0.94 BWI76_RS17960 DNA-binding transcriptional regulator KdgR — —
Serratia liquefaciens MT49 0.75 IAI46_14830 manganese efflux pump MntP 0.80 IAI46_10820 DNA-binding transcriptional regulator KdgR low > 86
Pectobacterium carotovorum WPP14 0.73 HER17_RS11345 manganese efflux pump MntP 0.87 HER17_RS11535 DNA-binding transcriptional regulator KdgR low > 75
Dickeya dianthicola ME23 0.73 DZA65_RS11680 manganese efflux pump MntP 0.89 DZA65_RS11830 DNA-binding transcriptional regulator KdgR low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS11335 manganese efflux pump MntP 0.89 HGI48_RS11490 DNA-binding transcriptional regulator KdgR low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS11300 manganese efflux pump MntP 0.89 DDA3937_RS11445 DNA-binding transcriptional regulator KdgR low > 74
Rahnella sp. WP5 0.68 EX31_RS24680 manganese efflux pump MntP 0.84 EX31_RS24895 DNA-binding transcriptional regulator KdgR low > 89
Erwinia tracheiphila SCR3 0.67 LU632_RS00575 mntP manganese efflux pump MntP 0.80 LU632_RS13230 kdgR DNA-binding transcriptional regulator KdgR low > 74
Pantoea sp. MT58 0.66 IAI47_01120 manganese efflux pump MntP 0.85 IAI47_08720 DNA-binding transcriptional regulator KdgR low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_1725 Protein of unknown function DUF204 0.24 Psyr_4014 regulatory protein, IclR low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_1725 Protein of unknown function DUF204 0.24 Psyr_4014 regulatory protein, IclR low > 86
Variovorax sp. SCN45 0.59 GFF1356 Putative manganese efflux pump MntP 0.26 GFF3166 Transcriptional regulator, IclR family low > 127
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS33240 membrane protein 0.61 BPHYT_RS10950 transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS02630 membrane protein 0.23 HSERO_RS02910 IclR family transcriptional regulator low > 78
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS06635 manganese efflux pump MntP family protein 0.20 A4249_RS07690 IclR family transcriptional regulator low > 48
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5174.1 Integral membrane protein 0.20 Xcc-8004.484.1 Pca regulon regulatory protein PcaR — —
Rhodanobacter denitrificans MT42 0.47 LRK55_RS05125 manganese efflux pump MntP family protein 0.21 LRK55_RS04250 IclR family transcriptional regulator C-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS05350 manganese efflux pump MntP family protein 0.21 LRK54_RS04475 helix-turn-helix domain-containing protein low > 59
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS10455 manganese efflux pump MntP family protein 0.22 HMPREF1078_RS01425 IclR family transcriptional regulator low > 61

Not shown: 13 genomes with orthologs for GFF2835 only; 25 genomes with orthologs for GFF2842 only