Conservation of cofitness between GFF4843 and GFF2813 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4843 D-glucarate permease 1.0 GFF2813 YcgN (Fragment) 0.56 16
Escherichia coli BW25113 0.97 b2789 gudP predicted D-glucarate transporter (NCBI) 0.93 b1181 ycgN conserved protein (RefSeq) low > 76
Escherichia coli ECOR27 0.97 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.91 NOLOHH_20775 ycgN YcgN family cysteine cluster protein low > 75
Escherichia coli ECOR38 0.97 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.91 HEPCGN_24695 ycgN YcgN family cysteine cluster protein low > 87
Escherichia fergusonii Becca 0.97 EFB2_01128 putative glucarate transporter 0.91 EFB2_02750 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00942 putative glucarate transporter 0.91 OHPLBJKB_02510 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.97 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.91 ECOLIN_RS07145 YcgN family cysteine cluster protein
Escherichia coli ECRC62 0.97 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.93 BNILDI_18935 ycgN YcgN family cysteine cluster protein low > 75
Escherichia coli BL21 0.97 ECD_02634 putative D-glucarate transporter 0.92 ECD_01156 UPF0153 family cysteine cluster protein
Escherichia coli ECRC100 0.97 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.91 OKFHMN_28245 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC98 0.97 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.91 JDDGAC_06265 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC102 0.97 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.91 NIAGMN_27975 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC99 0.97 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.91 KEDOAH_25260 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC101 0.97 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.91 MCAODC_21925 ycgN YcgN family cysteine cluster protein low > 87
Klebsiella michiganensis M5al 0.97 BWI76_RS22835 MFS transporter 0.88 BWI76_RS17765 hypothetical protein low > 92
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.87 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.85 MPMX20_02704 hypothetical protein low > 85
Rahnella sp. WP5 0.86 EX31_RS03160 MFS transporter 0.74 EX31_RS10560 YcgN family cysteine cluster protein low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS06310 MFS transporter 0.77 LU632_RS13100 YcgN family cysteine cluster protein low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.78 HER17_RS11240 YcgN family cysteine cluster protein low > 75
Pantoea sp. MT58 0.83 IAI47_04080 MFS transporter 0.76 IAI47_08870 YcgN family cysteine cluster protein low > 76
Dickeya dadantii 3937 0.82 DDA3937_RS17055 MFS transporter 0.78 DDA3937_RS11190 YcgN family cysteine cluster protein low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.77 DZA65_RS11570 YcgN family cysteine cluster protein low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.77 HGI48_RS11225 YcgN family cysteine cluster protein low > 71
Pseudomonas putida KT2440 0.69 PP_3600 glucarate transporter 0.50 PP_4587 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_05295 glucarate transporter 0.48 AO353_17875 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS04245 MFS transporter 0.46 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS04245 MFS transporter 0.46 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas sp. RS175 0.68 PFR28_00144 putative glucarate transporter 0.50 PFR28_00716 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_5043 D-galactarate permease 0.49 PfGW456L13_4492 YcgN (Fragment) low > 87
Pseudomonas simiae WCS417 0.68 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.46 PS417_07400 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_3297 D-galactarate permease 0.50 Pf6N2E2_2723 YcgN (Fragment) low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_07175 glucarate transporter 0.50 AO356_04400 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4226 D-galactonate transporter 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4226 D-galactonate transporter 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1108 D-galactarate permease 0.50 Pf1N1B4_3349 YcgN (Fragment) 0.19 74
Pseudomonas stutzeri RCH2 0.09 Psest_4232 Sugar phosphate permease 0.47 Psest_2992 Uncharacterized conserved protein low > 67

Not shown: 14 genomes with orthologs for GFF4843 only; 24 genomes with orthologs for GFF2813 only