| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Sphingobium sp. HT1-2 | 1.0 | GFF4548 | | Permease of the drug/metabolite transporter (DMT) superfamily | 1.0 | GFF2147 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.74 | 8 |
| Sphingomonas koreensis DSMZ 15582 | 0.52 | Ga0059261_3262 | | Predicted permeases | 0.85 | Ga0059261_2272 | | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit | low | > 68 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS13475 | | DMT family transporter | 0.69 | A4249_RS13195 | | alpha-ketoacid dehydrogenase subunit beta | low | > 48 |
| Bosea sp. OAE506 | 0.26 | ABIE41_RS13180 | | DMT family transporter | 0.70 | ABIE41_RS02480 | | alpha-ketoacid dehydrogenase subunit beta | low | > 77 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.23 | Xcc-8004.3034.1 | | Integral membrane protein | 0.39 | Xcc-8004.570.1 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | low | > 74 |
| Agrobacterium fabrum C58 | 0.22 | Atu0985 | | permease | 0.67 | Atu3472 | | 2-oxoisovalerate dehydrogenase subunit beta | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.22 | SMc02371 | | hypothetical protein | 0.67 | SMc03202 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | low | > 103 |
| Lysobacter sp. OAE881 | 0.22 | ABIE51_RS13735 | | DMT family transporter | 0.39 | ABIE51_RS04040 | | alpha-ketoacid dehydrogenase subunit beta | low | > 62 |
| Pseudomonas aeruginosa MRSN321 | 0.19 | DY961_RS04080 | | DMT family transporter | 0.71 | DY961_RS17620 | | alpha-ketoacid dehydrogenase subunit beta | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.19 | DQ20_RS35105 | | DMT family transporter | 0.71 | DQ20_RS39850 | | alpha-ketoacid dehydrogenase subunit beta | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.19 | IKLFDK_13190 | | EamA family transporter | 0.71 | IKLFDK_11030 | | 2-oxoisovalerate dehydrogenase subunit beta | low | > 98 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_04365 | | EamA-like transporter family | 0.40 | OKGIIK_00750 | acoB | alpha-ketoacid dehydrogenase subunit beta | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.18 | LRK53_RS13025 | | DMT family transporter | 0.40 | LRK53_RS17290 | | alpha-ketoacid dehydrogenase subunit beta | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS15025 | | membrane protein | 0.38 | RR42_RS33050 | | 2-oxoisovalerate dehydrogenase | low | > 128 |
| Rhodanobacter denitrificans FW104-10B01 | 0.17 | LRK54_RS15700 | | DMT family transporter | 0.40 | LRK54_RS05880 | | alpha-ketoacid dehydrogenase subunit beta | — | — |
| Rhodanobacter denitrificans MT42 | 0.17 | LRK55_RS15450 | | DMT family transporter | 0.40 | LRK55_RS05635 | | alpha-ketoacid dehydrogenase subunit beta | — | — |
| Ralstonia solanacearum UW163 | 0.16 | UW163_RS09945 | | EamA/RhaT family transporter | 0.38 | UW163_RS14255 | | alpha-ketoacid dehydrogenase subunit beta | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.16 | RALBFv3_RS03725 | | EamA/RhaT family transporter | 0.38 | RALBFv3_RS00945 | | alpha-ketoacid dehydrogenase subunit beta | low | > 76 |
| Variovorax sp. OAS795 | 0.15 | ABID97_RS22600 | | DMT family transporter | 0.68 | ABID97_RS06675 | | alpha-ketoacid dehydrogenase subunit beta | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.14 | RPSI07_RS13505 | | EamA/RhaT family transporter | 0.39 | RPSI07_RS16525 | | alpha-ketoacid dehydrogenase subunit beta | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.14 | ABCV34_RS14990 | | DMT family transporter | 0.69 | ABCV34_RS04970 | | alpha-ketoacid dehydrogenase subunit beta | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.14 | RS_RS11170 | | EamA/RhaT family transporter | 0.37 | RS_RS09075 | | alpha-ketoacid dehydrogenase subunit beta | low | > 80 |
| Shewanella amazonensis SB2B | 0.13 | Sama_1083 | | integral membrane domain-containing protein (RefSeq) | 0.47 | Sama_1710 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) | low | > 62 |
Not shown: 32 genomes with orthologs for GFF4548 only; 22 genomes with orthologs for GFF2147 only