Conservation of cofitness between GFF3853 and GFF1955 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3853 Multidrug transporter MdtC 1.0 GFF1955 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.55 6
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0482 Cation/multidrug efflux pump 0.90 EX28DRAFT_0270 fatty oxidation complex, beta subunit FadI low > 76
Escherichia coli ECRC102 0.90 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 0.91 NIAGMN_20330 fadI acetyl-CoA C-acyltransferase FadI — —
Escherichia coli ECRC101 0.90 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 0.91 MCAODC_13585 fadI acetyl-CoA C-acyltransferase FadI low > 87
Escherichia coli ECRC98 0.90 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 0.91 JDDGAC_26515 fadI acetyl-CoA C-acyltransferase FadI low > 86
Escherichia coli ECRC99 0.90 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 0.90 KEDOAH_05640 fadI acetyl-CoA C-acyltransferase FadI — —
Escherichia fergusonii Becca 0.90 EFB2_01779 Multidrug resistance protein MdtC 0.91 EFB2_01517 3-ketoacyl-CoA thiolase FadI low > 86
Escherichia coli ECRC100 0.90 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 0.91 OKFHMN_22555 fadI acetyl-CoA C-acyltransferase FadI low > 80
Escherichia coli BL21 0.90 ECD_01981 multidrug efflux system, subunit C 0.91 ECD_02266 beta-ketoacyl-CoA thiolase, anaerobic, subunit low > 61
Escherichia coli Nissle 1917 0.90 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.91 ECOLIN_RS13555 acetyl-CoA C-acyltransferase FadI — —
Escherichia coli ECOR27 0.90 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.92 NOLOHH_14190 fadI acetyl-CoA C-acyltransferase FadI low > 75
Escherichia coli BW25113 0.90 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.91 b2342 yfcY acetyl-CoA acetyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.91 OHPLBJKB_01364 3-ketoacyl-CoA thiolase FadI low > 73
Enterobacter sp. TBS_079 0.90 MPMX20_03062 Multidrug resistance protein MdtC 0.90 MPMX20_03269 3-ketoacyl-CoA thiolase FadI low > 85
Escherichia coli ECRC62 0.90 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.92 BNILDI_13105 fadI acetyl-CoA C-acyltransferase FadI low > 75
Escherichia coli ECOR38 0.90 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.91 HEPCGN_21750 fadI acetyl-CoA C-acyltransferase FadI low > 87
Klebsiella michiganensis M5al 0.88 BWI76_RS19260 multidrug transporter subunit MdtC 0.89 BWI76_RS20460 acetyl-CoA C-acyltransferase FadI low > 92
Serratia liquefaciens MT49 0.81 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.80 IAI46_18050 acetyl-CoA C-acyltransferase FadI low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.74 HER17_RS06885 acetyl-CoA C-acyltransferase FadI low > 75
Pantoea sp. MT58 0.78 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.72 IAI47_06125 acetyl-CoA C-acyltransferase FadI low > 76
Dickeya dadantii 3937 0.77 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.70 DDA3937_RS14605 acetyl-CoA C-acyltransferase FadI low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.71 HGI48_RS14555 acetyl-CoA C-acyltransferase FadI low > 71
Ralstonia solanacearum PSI07 0.62 RPSI07_RS05520 nodulation protein 0.33 RPSI07_RS21350 acetyl-CoA C-acyltransferase low > 81
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.32 ABZR87_RS07810 acetyl-CoA C-acetyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_22900 acriflavine resistance protein B 0.32 AO353_13880 acetyl-CoA acetyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.32 PfGW456L13_29 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.31 Psyr_0645 3-ketoacyl-CoA thiolase low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.31 Psyr_0645 3-ketoacyl-CoA thiolase low > 86
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.32 PFLU_RS17190 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.32 PFLU_RS17190 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.32 PP_0582 Thiolase family protein low > 96
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.32 PS417_15175 acetyl-CoA acetyltransferase — —
Rahnella sp. WP5 0.52 EX31_RS13375 MMPL family transporter 0.77 EX31_RS19710 acetyl-CoA C-acyltransferase FadI low > 89
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.32 Pf6N2E2_3492 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.31 AO356_08090 acetyl-CoA acetyltransferase low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.31 PFR28_05239 3-ketoacyl-CoA thiolase FadI low > 88
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.33 QEN71_RS22970 acetyl-CoA C-acetyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_06491 multidrug efflux pump 0.33 H281DRAFT_05130 3-ketoacyl-CoA thiolase — —

Not shown: 23 genomes with orthologs for GFF3853 only; 20 genomes with orthologs for GFF1955 only