Conservation of cofitness between Psest_2565 and Psest_1804 in Pseudomonas stutzeri RCH2

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2565 Transcriptional regulator 1.0 Psest_1804 Superfamily II DNA and RNA helicases 0.21 11
Dickeya dadantii 3937 0.35 DDA3937_RS14890 LysR family transcriptional regulator 0.41 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase low > 74
Enterobacter sp. TBS_079 0.32 MPMX20_02550 HTH-type transcriptional regulator YhaJ 0.41 MPMX20_04066 ATP-dependent RNA helicase DeaD low > 85
Pseudomonas sp. RS175 0.29 PFR28_01506 putative HTH-type transcriptional regulator YahB 0.85 PFR28_00980 ATP-dependent RNA helicase DeaD low > 88
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_3137 Transcriptional regulator, LysR family 0.85 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_28560 LysR family transcriptional regulator 0.85 AO353_19130 RNA helicase — —
Shewanella oneidensis MR-1 0.24 SO1907 transcriptional regulator, LysR family (NCBI ptt file) 0.42 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.24 Shewana3_1683 LysR family transcriptional regulator (RefSeq) 0.41 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS14355 LysR family transcriptional regulator 0.46 LRK54_RS02650 DEAD/DEAH box helicase low > 59
Rhodanobacter denitrificans MT42 0.23 LRK55_RS14075 LysR family transcriptional regulator 0.46 LRK55_RS02405 DEAD/DEAH box helicase low > 63
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3647 LysR family transcriptional regulator PA4989 0.85 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_08825 LysR family transcriptional regulator 0.85 AO356_03110 RNA helicase — —
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_1450 LysR family transcriptional regulator PA4989 0.85 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0309 transcriptional regulator, LysR family (TIGR) 0.36 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) low > 55
Shewanella loihica PV-4 0.20 Shew_1149 LysR family transcriptional regulator (RefSeq) 0.43 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 60
Pseudomonas putida KT2440 0.19 PP_4929 Transcriptional regulator, LysR family 0.86 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD — —
Dickeya dianthicola 67-19 0.18 HGI48_RS04505 LysR family transcriptional regulator 0.41 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase low > 71
Dickeya dianthicola ME23 0.18 DZA65_RS04425 LysR family transcriptional regulator 0.41 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase — —
Pseudomonas simiae WCS417 0.18 PS417_02340 LysR family transcriptional regulator 0.85 PS417_08540 RNA helicase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4420 DNA-binding transcriptional activator of the allD operon 0.41 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) low > 78

Not shown: 14 genomes with orthologs for Psest_2565 only; 48 genomes with orthologs for Psest_1804 only